add patch to fix tree-optimization bug in GCC 12.3.0 and 13.1.0 for ARM architectures with SVE support by casparvl · Pull Request #20218 · easybuilders/easybuild-easyconfigs

casparvl · 2024-03-26T17:03:08Z

(created using eb --new-pr)

Similar to https://github.com/easybuilders/easybuild-easyconfigs/pull/19974/files .

Note from upstream that version 12.3.0, 13.1.0 and 13.2.0 are all known to be affected: https://gcc.gnu.org/bugzilla/show_bug.cgi?id=111478

We now also actually encountered it for 12.3.0 in EESSI: EESSI/software-layer#507 (comment)

casparvl · 2024-03-26T17:14:32Z

@boegelbot please test @ generoso

boegelbot · 2024-03-26T17:15:08Z

@casparvl: Request for testing this PR well received on login1

PR test command 'EB_PR=20218 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_20218 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 13208

Test results coming soon (I hope)...

Details

- notification for comment with ID 2021025089 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

casparvl · 2024-03-26T17:15:51Z

@boegelbot please test @ jsc-zen3

boegelbot · 2024-03-26T17:20:07Z

@casparvl: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=20218 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_20218 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

exit code: 0
output:

Submitted batch job 3865

Test results coming soon (I hope)...

Details

- notification for comment with ID 2021028955 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2024-03-26T19:00:09Z

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.3, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.18
See https://gist.github.com/boegelbot/10c8c809c96ba307e51a883e65d9e50d for a full test report.

casparvl · 2024-03-26T19:21:17Z

@boegelbot please test @ jsc-zen3

Micket

lgtm

boegelbot · 2024-03-26T19:30:08Z

@casparvl: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=20218 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_20218 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

exit code: 0
output:

Submitted batch job 3868

Test results coming soon (I hope)...

Details

- notification for comment with ID 2021288699 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

casparvl · 2024-03-26T19:40:36Z

@boegelbot please test @ generoso

boegelbot · 2024-03-26T19:45:08Z

@casparvl: Request for testing this PR well received on login1

PR test command 'EB_PR=20218 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_20218 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 13211

Test results coming soon (I hope)...

Details

- notification for comment with ID 2021321267 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

Micket · 2024-03-26T20:03:41Z

Test report by @Micket
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
vera-skylake-build - Linux Rocky Linux 8.9, x86_64, Intel Xeon Processor (Skylake, IBRS, no TSX), Python 3.6.8
See https://gist.github.com/Micket/6e34c1a128cd10022035eb51a2ceac52 for a full test report.

boegelbot · 2024-03-26T20:50:19Z

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
cns1 - Linux Rocky Linux 8.9, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/1faf0bc7995692e7ed2bc52eab7042ca for a full test report.

boegelbot · 2024-03-26T21:11:03Z

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.3, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.18
See https://gist.github.com/boegelbot/f103b594716ddd8440f6d0edcac94b43 for a full test report.

boegel

lgtm

boegel · 2024-03-26T21:18:36Z

Going in, thanks @casparvl!

casparvl · 2024-03-26T21:47:15Z

Test report by @casparvl
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
tcn1.local.snellius.surf.nl - Linux RHEL 8.6, x86_64, AMD EPYC 7H12 64-Core Processor, Python 3.6.8
See https://gist.github.com/casparvl/2269e3214cc8e8519338b54aff432159 for a full test report.

boegel · 2024-03-26T23:06:30Z

Test report by @boegel
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
node3125.skitty.os - Linux RHEL 8.8, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, Python 3.6.8
See https://gist.github.com/boegel/f7f9036b41f32f2ee96747f5db8f0c35 for a full test report.

boegelbot · 2024-03-26T23:08:46Z

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
cns2 - Linux Rocky Linux 8.9, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/5f53ad7f6832f66cdd9366dc06fb4656 for a full test report.

Fix from easybuilders#19974 should also be applied to 12.3.0 and 13.1.0

012a8f6

casparvl changed the title ~~Fix from https://github.com/easybuilders/easybuild-easyconfigs/pull/19974 should also be applied to 12.3.0 and 13.1.0~~ add patch to fix tree-optimization bug in GCC 12.3.0 and 13.1.0 for ARM architectures with SVE support Mar 26, 2024

casparvl added the bug fix label Mar 26, 2024

casparvl mentioned this pull request Mar 26, 2024

Actually add 13.1.0... #20220

Closed

casparvl marked this pull request as draft March 26, 2024 17:07

Actually add 13.1.0...

c5ba5a7

casparvl marked this pull request as ready for review March 26, 2024 17:14

Micket requested changes Mar 26, 2024

View reviewed changes

Comment thread easybuild/easyconfigs/g/GCCcore/GCCcore-12.3.0.eb

Readd accidentally removed patch

5db3986

Micket approved these changes Mar 26, 2024

View reviewed changes

boegel added this to the release after 4.9.0 milestone Mar 26, 2024

boegel approved these changes Mar 26, 2024

View reviewed changes

boegel merged commit 064c6f0 into easybuilders:develop Mar 26, 2024

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casparvl commented Mar 26, 2024 •

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