{vis}[gfbf/2023b] Polyscope v2.2.1 by akesandgren · Pull Request #23108 · easybuilders/easybuild-easyconfigs

akesandgren · 2025-06-16T13:16:23Z

(created using eb --new-pr)

…ope-2.2.1_use_external_GLFW+GLM.patch

github-actions · 2025-06-16T13:16:50Z

Updated software `GLFW-3.4-GCCcore-13.2.0.eb`

Diff against GLFW-3.4-GCCcore-12.3.0.eb

easybuild/easyconfigs/g/GLFW/GLFW-3.4-GCCcore-12.3.0.eb

diff --git a/easybuild/easyconfigs/g/GLFW/GLFW-3.4-GCCcore-12.3.0.eb b/easybuild/easyconfigs/g/GLFW/GLFW-3.4-GCCcore-13.2.0.eb
index dda659e47c..2d1501dbb3 100644
--- a/easybuild/easyconfigs/g/GLFW/GLFW-3.4-GCCcore-12.3.0.eb
+++ b/easybuild/easyconfigs/g/GLFW/GLFW-3.4-GCCcore-13.2.0.eb
@@ -7,20 +7,20 @@ homepage = 'https://www.glfw.org'
 description = """GLFW is an Open Source, multi-platform library for OpenGL,
 OpenGL ES and Vulkan development on the desktop"""
 
-toolchain = {'name': 'GCCcore', 'version': '12.3.0'}
+toolchain = {'name': 'GCCcore', 'version': '13.2.0'}
 
 source_urls = ['https://github.com/%(namelower)s/%(namelower)s/archive/']
 sources = ['%(version)s.tar.gz']
 checksums = ['c038d34200234d071fae9345bc455e4a8f2f544ab60150765d7704e08f3dac01']
 
 builddependencies = [
-    ('CMake', '3.26.3'),
+    ('CMake', '3.27.6'),
     ('binutils', '2.40'),
-    ('pkgconf', '1.9.5'),
+    ('pkgconf', '2.0.3'),
 ]
 dependencies = [
     ('Wayland', '1.22.0'),
-    ('X11', '20230603'),
+    ('X11', '20231019'),
 ]
 
 # build both static and shared libraries

Diff against GLFW-3.4-GCCcore-12.2.0.eb

easybuild/easyconfigs/g/GLFW/GLFW-3.4-GCCcore-12.2.0.eb

diff --git a/easybuild/easyconfigs/g/GLFW/GLFW-3.4-GCCcore-12.2.0.eb b/easybuild/easyconfigs/g/GLFW/GLFW-3.4-GCCcore-13.2.0.eb
index 4a154fbe1e..2d1501dbb3 100644
--- a/easybuild/easyconfigs/g/GLFW/GLFW-3.4-GCCcore-12.2.0.eb
+++ b/easybuild/easyconfigs/g/GLFW/GLFW-3.4-GCCcore-13.2.0.eb
@@ -7,20 +7,20 @@ homepage = 'https://www.glfw.org'
 description = """GLFW is an Open Source, multi-platform library for OpenGL,
 OpenGL ES and Vulkan development on the desktop"""
 
-toolchain = {'name': 'GCCcore', 'version': '12.2.0'}
+toolchain = {'name': 'GCCcore', 'version': '13.2.0'}
 
 source_urls = ['https://github.com/%(namelower)s/%(namelower)s/archive/']
 sources = ['%(version)s.tar.gz']
 checksums = ['c038d34200234d071fae9345bc455e4a8f2f544ab60150765d7704e08f3dac01']
 
 builddependencies = [
-    ('CMake', '3.24.3'),
-    ('binutils', '2.39'),
-    ('pkgconf', '1.9.3'),
+    ('CMake', '3.27.6'),
+    ('binutils', '2.40'),
+    ('pkgconf', '2.0.3'),
 ]
 dependencies = [
     ('Wayland', '1.22.0'),
-    ('X11', '20221110'),
+    ('X11', '20231019'),
 ]
 
 # build both static and shared libraries

Diff against GLFW-3.3.8-GCCcore-11.3.0.eb

easybuild/easyconfigs/g/GLFW/GLFW-3.3.8-GCCcore-11.3.0.eb

diff --git a/easybuild/easyconfigs/g/GLFW/GLFW-3.3.8-GCCcore-11.3.0.eb b/easybuild/easyconfigs/g/GLFW/GLFW-3.4-GCCcore-13.2.0.eb
index c8fe2ff276..2d1501dbb3 100644
--- a/easybuild/easyconfigs/g/GLFW/GLFW-3.3.8-GCCcore-11.3.0.eb
+++ b/easybuild/easyconfigs/g/GLFW/GLFW-3.4-GCCcore-13.2.0.eb
@@ -1,38 +1,39 @@
 easyblock = 'CMakeMake'
 
 name = 'GLFW'
-version = '3.3.8'
+version = '3.4'
 
 homepage = 'https://www.glfw.org'
 description = """GLFW is an Open Source, multi-platform library for OpenGL,
 OpenGL ES and Vulkan development on the desktop"""
 
-toolchain = {'name': 'GCCcore', 'version': '11.3.0'}
+toolchain = {'name': 'GCCcore', 'version': '13.2.0'}
 
 source_urls = ['https://github.com/%(namelower)s/%(namelower)s/archive/']
 sources = ['%(version)s.tar.gz']
-checksums = ['f30f42e05f11e5fc62483e513b0488d5bceeab7d9c5da0ffe2252ad81816c713']
+checksums = ['c038d34200234d071fae9345bc455e4a8f2f544ab60150765d7704e08f3dac01']
 
 builddependencies = [
-    ('CMake', '3.23.1'),
-    ('binutils', '2.38'),
-    ('pkgconf', '1.8.0'),
+    ('CMake', '3.27.6'),
+    ('binutils', '2.40'),
+    ('pkgconf', '2.0.3'),
 ]
-
 dependencies = [
-    ('X11', '20220504'),
+    ('Wayland', '1.22.0'),
+    ('X11', '20231019'),
 ]
 
 # build both static and shared libraries
 configopts = [
-    "-DBUILD_SHARED_LIBS=OFF",
-    "-DBUILD_SHARED_LIBS=ON",
+    '-DBUILD_SHARED_LIBS=OFF',
+    '-DBUILD_SHARED_LIBS=ON',
 ]
 
+
 sanity_check_paths = {
-    'files': ['include/GLFW/glfw3.h', 'include/GLFW/glfw3native.h',
-              'lib/libglfw3.a', 'lib/libglfw.%s' % SHLIB_EXT, 'lib/pkgconfig/glfw3.pc'],
-    'dirs': ['include/GLFW', 'lib/cmake/glfw3', 'lib/pkgconfig'],
+    'files': ['include/%(name)s/glfw3.h', 'include/%(name)s/glfw3native.h'] +
+             ['lib/libglfw3.a', 'lib/libglfw.%s' % SHLIB_EXT, 'lib/pkgconfig/glfw3.pc'],
+    'dirs': ['include/%(name)s', 'lib/cmake/glfw3', 'lib/pkgconfig'],
 }
 
 moduleclass = 'vis'

Updated software `GLM-1.0.1-GCCcore-13.2.0.eb`

Diff against GLM-1.0.1-GCCcore-13.3.0.eb

easybuild/easyconfigs/g/GLM/GLM-1.0.1-GCCcore-13.3.0.eb

diff --git a/easybuild/easyconfigs/g/GLM/GLM-1.0.1-GCCcore-13.3.0.eb b/easybuild/easyconfigs/g/GLM/GLM-1.0.1-GCCcore-13.2.0.eb
index 905306feab..67c0e33c58 100644
--- a/easybuild/easyconfigs/g/GLM/GLM-1.0.1-GCCcore-13.3.0.eb
+++ b/easybuild/easyconfigs/g/GLM/GLM-1.0.1-GCCcore-13.2.0.eb
@@ -8,20 +8,20 @@ description = """
 OpenGL Mathematics (GLM) is a header only C++ mathematics library for graphics
 software based on  the OpenGL Shading Language (GLSL) specifications."""
 
-toolchain = {'name': 'GCCcore', 'version': '13.3.0'}
+toolchain = {'name': 'GCCcore', 'version': '13.2.0'}
 
 source_urls = ['https://github.com/g-truc/glm/archive/']
 sources = ['%(version)s.tar.gz']
 checksums = ['9f3174561fd26904b23f0db5e560971cbf9b3cbda0b280f04d5c379d03bf234c']
 
 builddependencies = [
-    ('binutils', '2.42'),
-    ('CMake', '3.29.3'),
+    ('binutils', '2.40'),
+    ('CMake', '3.27.6'),
 ]
 
 sanity_check_paths = {
     'files': [],
-    'dirs': ['include/glm/gtc', 'include/glm/gtx'],
+    'dirs': ['include/glm/gtc', 'include/glm/gtx', 'share/glm'],
 }
 
 moduleclass = 'lib'

Diff against GLM-0.9.9.8-GCCcore-12.2.0.eb

easybuild/easyconfigs/g/GLM/GLM-0.9.9.8-GCCcore-12.2.0.eb

diff --git a/easybuild/easyconfigs/g/GLM/GLM-0.9.9.8-GCCcore-12.2.0.eb b/easybuild/easyconfigs/g/GLM/GLM-1.0.1-GCCcore-13.2.0.eb
index e083d5c870..67c0e33c58 100644
--- a/easybuild/easyconfigs/g/GLM/GLM-0.9.9.8-GCCcore-12.2.0.eb
+++ b/easybuild/easyconfigs/g/GLM/GLM-1.0.1-GCCcore-13.2.0.eb
@@ -1,33 +1,27 @@
 easyblock = 'CMakeMake'
 
 name = 'GLM'
-version = '0.9.9.8'
+version = '1.0.1'
 
 homepage = 'https://github.com/g-truc/glm'
 description = """
 OpenGL Mathematics (GLM) is a header only C++ mathematics library for graphics
 software based on  the OpenGL Shading Language (GLSL) specifications."""
 
-toolchain = {'name': 'GCCcore', 'version': '12.2.0'}
+toolchain = {'name': 'GCCcore', 'version': '13.2.0'}
 
 source_urls = ['https://github.com/g-truc/glm/archive/']
 sources = ['%(version)s.tar.gz']
-patches = [
-    'GLM-0.9.9.8_fix_missing_install.patch',
-]
-checksums = [
-    '7d508ab72cb5d43227a3711420f06ff99b0a0cb63ee2f93631b162bfe1fe9592',  # 0.9.9.8.tar.gz
-    '1cc199f9d66679b0b5e9a9fbe20bca0d9b15760fa172ca8759dd15bab35802ca',  # GLM-0.9.9.8_fix_missing_install.patch
-]
+checksums = ['9f3174561fd26904b23f0db5e560971cbf9b3cbda0b280f04d5c379d03bf234c']
 
 builddependencies = [
-    ('binutils', '2.39'),
-    ('CMake', '3.24.3'),
+    ('binutils', '2.40'),
+    ('CMake', '3.27.6'),
 ]
 
 sanity_check_paths = {
     'files': [],
-    'dirs': ['include/glm/gtc', 'include/glm/gtx'],
+    'dirs': ['include/glm/gtc', 'include/glm/gtx', 'share/glm'],
 }
 
 moduleclass = 'lib'

Diff against GLM-0.9.9.8-GCCcore-12.3.0.eb

easybuild/easyconfigs/g/GLM/GLM-0.9.9.8-GCCcore-12.3.0.eb

diff --git a/easybuild/easyconfigs/g/GLM/GLM-0.9.9.8-GCCcore-12.3.0.eb b/easybuild/easyconfigs/g/GLM/GLM-1.0.1-GCCcore-13.2.0.eb
index 29477dd798..67c0e33c58 100644
--- a/easybuild/easyconfigs/g/GLM/GLM-0.9.9.8-GCCcore-12.3.0.eb
+++ b/easybuild/easyconfigs/g/GLM/GLM-1.0.1-GCCcore-13.2.0.eb
@@ -1,33 +1,27 @@
 easyblock = 'CMakeMake'
 
 name = 'GLM'
-version = '0.9.9.8'
+version = '1.0.1'
 
 homepage = 'https://github.com/g-truc/glm'
 description = """
 OpenGL Mathematics (GLM) is a header only C++ mathematics library for graphics
 software based on  the OpenGL Shading Language (GLSL) specifications."""
 
-toolchain = {'name': 'GCCcore', 'version': '12.3.0'}
+toolchain = {'name': 'GCCcore', 'version': '13.2.0'}
 
 source_urls = ['https://github.com/g-truc/glm/archive/']
 sources = ['%(version)s.tar.gz']
-patches = [
-    'GLM-0.9.9.8_fix_missing_install.patch',
-]
-checksums = [
-    '7d508ab72cb5d43227a3711420f06ff99b0a0cb63ee2f93631b162bfe1fe9592',  # 0.9.9.8.tar.gz
-    '1cc199f9d66679b0b5e9a9fbe20bca0d9b15760fa172ca8759dd15bab35802ca',  # GLM-0.9.9.8_fix_missing_install.patch
-]
+checksums = ['9f3174561fd26904b23f0db5e560971cbf9b3cbda0b280f04d5c379d03bf234c']
 
 builddependencies = [
     ('binutils', '2.40'),
-    ('CMake', '3.26.3'),
+    ('CMake', '3.27.6'),
 ]
 
 sanity_check_paths = {
     'files': [],
-    'dirs': ['include/glm/gtc', 'include/glm/gtx'],
+    'dirs': ['include/glm/gtc', 'include/glm/gtx', 'share/glm'],
 }
 
 moduleclass = 'lib'

akesandgren · 2025-06-16T13:28:52Z

Test report by @akesandgren
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
b-an02.hpc2n.umu.se - Linux Ubuntu 20.04, x86_64, Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz, Python 3.8.10
See https://gist.github.com/akesandgren/61f5d5cec5596447b950c2dd5a1559f8 for a full test report.

akesandgren · 2025-06-16T14:17:02Z

@smoors See this one instead

Micket · 2025-06-24T11:41:44Z

+
+modextrapaths = {
+    'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages',
+}
+


remove

Suggested change

modextrapaths = {

'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages',

}

Micket · 2025-06-24T11:44:09Z

i commited the fix to remove the hardcoded python path, but there are conflicts to resolve here

akesandgren · 2025-06-24T13:00:14Z

@Micket Conflicts resolved

Micket

lgtm

Micket · 2025-06-24T14:05:37Z

@boegelbot please test @ jsc-zen3

boegelbot · 2025-06-24T14:10:11Z

@Micket: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=23108 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_23108 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

exit code: 0
output:

Submitted batch job 6987

Test results coming soon (I hope)...

Details

- notification for comment with ID 3000652625 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2025-06-24T14:10:28Z

Test report by @boegelbot
FAILED
Build succeeded for 0 out of 1 (1 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.5, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.21
See https://gist.github.com/boegelbot/b9404e52709c7ec966db92283128c7c2 for a full test report.

Micket · 2025-07-12T01:51:00Z

bot complains:

== 2025-06-24 14:10:25,845 build_log.py:226 ERROR EasyBuild encountered an error (at easybuild/easybuild-framework/easybuild/base/exceptions.py:126 in init): Checksum verification for /project/def-maintainers/boegelbot/sources/p/Polyscope/happly-20240207-master.tar.xz using {'happly-20240207-master.tar.xz': '57b0e57035ba6603825dfe7db52e532f0ce0925551dbddb8ded5930c6525623f'} failed. (at easybuild/easybuild-framework/easybuild/framework/easyblock.py:2685 in checksum_step)

…asyconfigs into 20250616151616_new_pr_Polyscope221

akesandgren · 2026-03-13T09:11:03Z

@boegelbot Please test @ jsc-zen3

boegelbot · 2026-03-13T09:20:09Z

@akesandgren: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=23108 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_23108 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

exit code: 0
output:

Submitted batch job 10022

Test results coming soon (I hope)...

Details

- notification for comment with ID 4053736417 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2026-03-13T09:20:27Z

Test report by @boegelbot
FAILED
Build succeeded for 0 out of 1 (total: 0 secs) (1 easyconfigs in total)
jsczen3c2.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.7, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.25
See https://gist.github.com/boegelbot/87c0d40b5808e3db846c7275a020c949 for a full test report.

akesandgren · 2026-03-13T11:59:01Z

@boegelbot Please test @ jsc-zen3

boegelbot · 2026-03-13T12:00:08Z

@akesandgren: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=23108 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_23108 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

exit code: 0
output:

Submitted batch job 10023

Test results coming soon (I hope)...

Details

- notification for comment with ID 4054591365 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2026-03-13T12:05:25Z

Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (total: 5 mins 1 secs) (1 easyconfigs in total)
jsczen3c2.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.7, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.25
See https://gist.github.com/boegelbot/da1ff65a2b3d1ad04ef49af490524925 for a full test report.

Micket

lgtm

adding easyconfigs: Polyscope-2.2.1-gfbf-2023b.eb and patches: Polysc…

b212dfa

…ope-2.2.1_use_external_GLFW+GLM.patch

akesandgren added the new label Jun 16, 2025

github-actions Bot added the update label Jun 16, 2025

akesandgren mentioned this pull request Jun 16, 2025

{lib,vis}[GCCcore/12.3.0,gfbf/2023a] Polyscope v2.2.1, GLM v1.0.1 #20398

Closed

Micket reviewed Jun 24, 2025

View reviewed changes

Update easybuild/easyconfigs/p/Polyscope/Polyscope-2.2.1-gfbf-2023b.eb

a5e20bf

PR 23108: Drop GLM and GLFW which are already merged.

13408a3

github-actions Bot removed the update label Jun 24, 2025

Micket previously approved these changes Jun 24, 2025

View reviewed changes

Thyre added the 2023b label Aug 18, 2025

Merge branch 'develop' of https://github.com/easybuilders/easybuild-e…

3748973

…asyconfigs into 20250616151616_new_pr_Polyscope221

Polyscope: fix wrong checksums for happly.

fe5acf6

akesandgren dismissed Micket’s stale review via fe5acf6 March 13, 2026 09:31

Polyscope: drop modextrapath with standard PYTHONPATH (again).

ef613c3

akesandgren added this to the next release (5.2.2?) milestone Mar 13, 2026

Micket approved these changes Mar 21, 2026

View reviewed changes

Micket merged commit d4eddaa into easybuilders:develop Mar 21, 2026
6 checks passed

akesandgren deleted the 20250616151616_new_pr_Polyscope221 branch March 23, 2026 06:33

Conversation

akesandgren commented Jun 16, 2025

Uh oh!

github-actions Bot commented Jun 16, 2025

Updated software GLFW-3.4-GCCcore-13.2.0.eb

Updated software GLM-1.0.1-GCCcore-13.2.0.eb

Uh oh!

akesandgren commented Jun 16, 2025

Uh oh!

akesandgren commented Jun 16, 2025

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Micket commented Jul 12, 2025

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Updated software `GLFW-3.4-GCCcore-13.2.0.eb`

Updated software `GLM-1.0.1-GCCcore-13.2.0.eb`