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I had one issue with the easyconfig during the build. The LIBS variable somehow becomes LIBS = -lm -lpthread-lm and this obviously results in error: cannot find -lpthread-lm during linking. Here is the log of the build: easybuild-fastq-tools-0.8-20171123.134323.HYgMZ.log
@SethosII The problem is caused by the configure script not taking into account that $LIBS may be already defined in the environment; it's defined by EasyBuild as -lm -lpthread.
Test report by @boegel SUCCESS
Build succeeded for 2 out of 2 (1 easyconfigs in this PR)
node2598.golett.os - Linux centos linux 7.4.1708, Intel(R) Xeon(R) CPU E5-2680 v3 @ 2.50GHz, Python 2.7.5
See https://gist.github.com/bb819fc12b20c4202fbc1c6735c45267 for a full test report.
Test report by @boegel SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in this PR)
gligar02.gligar.os - Linux centos linux 7.4.1708, Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz, Python 2.7.5
See https://gist.github.com/9107fedc92d98f6c6e4954cd875a7345 for a full test report.
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This adds fastq-tools.
I had one issue with the easyconfig during the build. The
LIBSvariable somehow becomesLIBS = -lm -lpthread-lmand this obviously results inerror: cannot find -lpthread-lmduring linking. Here is the log of the build: easybuild-fastq-tools-0.8-20171123.134323.HYgMZ.log