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{bio}[foss/2016b,intel/2016b] PheWAS v0.12#6030

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boegel merged 2 commits intoeasybuilders:developfrom
vanzod:20180315115946_new_pr_PheWAS012
Aug 13, 2018
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{bio}[foss/2016b,intel/2016b] PheWAS v0.12#6030
boegel merged 2 commits intoeasybuilders:developfrom
vanzod:20180315115946_new_pr_PheWAS012

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@vanzod vanzod commented Mar 15, 2018

(created using eb --new-pr)

@vanzod vanzod added the new label Mar 15, 2018
@vanzod vanzod added this to the 3.6.0 milestone Mar 15, 2018
@vanzod vanzod changed the title {bio}[foss/2016b,intel/2016b] PheWAS v0.12, PheWAS v0.12 {bio}[foss/2016b,intel/2016b] PheWAS v0.12 Mar 15, 2018
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vanzod commented Mar 15, 2018

Test report by @vanzod
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in this PR)
cermis - Linux debian 9.3, Intel(R) Xeon(R) CPU E5620 @ 2.40GHz, Python 2.7.13
See https://gist.github.com/6d273e33a322cd407f704724b1374809 for a full test report.

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vanzod commented Mar 15, 2018

Depends on #5773

@boegel boegel modified the milestones: 3.6.0, next release Apr 24, 2018
@boegel boegel modified the milestones: 3.6.1, next release May 23, 2018
@boegel boegel modified the milestones: 3.6.2, next release Jul 6, 2018
@easybuilders easybuilders deleted a comment from boegelbot Aug 12, 2018
exts_list = [
('meta', '4.9-0', {
'source_tmpl': '%(name)s_%(version)s.tar.gz',
'source_urls': ['http://cran.r-project.org/src/contrib/'],
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@vanzod You'll also need to include https://cran.r-project.org/src/contrib/Archive/meta/ here (same goes for other extensions)...

Or, you can specify default extension options with the general exts_default_options easyconfig parameter, and only override where needed:

exts_default_options = {
    'source_urls': [
        'http://cran.r-project.org/src/contrib/Archive/%(name)s',  # package archive
        'http://cran.r-project.org/src/contrib/',  # current version of packages
        'http://cran.freestatistics.org/src/contrib',  # mirror alternative for current packages
    ],
    'source_tmpl': '%(name)s_%(version)s.tar.gz',
}

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vanzod commented Aug 13, 2018

Test report by @vanzod
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in this PR)
cermis - Linux debian 9.4, Intel(R) Xeon(R) CPU E5620 @ 2.40GHz, Python 2.7.13
See https://gist.github.com/57afe3df8fe98e0ce1f63ad92044199c for a full test report.

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boegel commented Aug 13, 2018

Test report by @boegel
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in this PR)
gligar03.gligar.os - Linux centos linux 7.4.1708, Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz, Python 2.7.5
See https://gist.github.com/3f8c0d65530411d1b4ce91a8ffeebba2 for a full test report.

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boegel commented Aug 13, 2018

Test report by @boegel
SUCCESS
Build succeeded for 69 out of 69 (2 easyconfigs in this PR)
node2672.swalot.os - Linux centos linux 7.4.1708, Intel(R) Xeon(R) CPU E5-2660 v3 @ 2.60GHz, Python 2.7.5
See https://gist.github.com/cf8b6e7875e3bb665b87ad4d3dc8c4c3 for a full test report.

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boegel commented Aug 13, 2018

Going in, thanks @vanzod!

@boegel boegel merged commit 0880b4b into easybuilders:develop Aug 13, 2018
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