Skip to content

angsd - install misc tools#6995

Merged
boegel merged 2 commits intoeasybuilders:developfrom
rug-cit-hpc:angsd_install_all_executables
Nov 19, 2018
Merged

angsd - install misc tools#6995
boegel merged 2 commits intoeasybuilders:developfrom
rug-cit-hpc:angsd_install_all_executables

Conversation

@bedroge
Copy link
Copy Markdown
Contributor

@bedroge bedroge commented Oct 11, 2018

This modification of the angsd easyconfigs makes sure that the additional tools from the misc dir are also installed.

@verdurin
Copy link
Copy Markdown
Member

Test report by @verdurin
FAILED
Build succeeded for 34 out of 36 (2 easyconfigs in this PR)
rescomp2 - Linux centos linux 7.3.1611, Intel(R) Xeon(R) Gold 6126 CPU @ 2.60GHz, Python 2.7.11
See https://gist.github.com/6ff61c5821bf0138253502a31e9244aa for a full test report.

@verdurin
Copy link
Copy Markdown
Member

Test report by @verdurin
FAILED
Build succeeded for 0 out of 2 (2 easyconfigs in this PR)
rescomp2 - Linux centos linux 7.3.1611, Intel(R) Xeon(R) Gold 6126 CPU @ 2.60GHz, Python 2.7.11
See https://gist.github.com/e1d766fcf826ce2135e46b7c70dec9e3 for a full test report.

@verdurin
Copy link
Copy Markdown
Member

Here's the error that's affecting HTSlib:

== 2018-11-17 10:07:54,675 build_log.py:158 ERROR EasyBuild crashed with an error (at ?:124 in __init__): FFTW/3.3.7-GCC-6.4.0-2.28-serial(23):ERROR:150: Module 'FFTW/3.3.7-GCC-6.4.0-2.28-serial' conflicts with the currently loaded module(s) 'FFTW/3.3.7-gompi-2018a' (at easybuild/tools/modules.py:777 in run_module)

@easybuilders easybuilders deleted a comment from boegelbot Nov 19, 2018
@boegel
Copy link
Copy Markdown
Member

boegel commented Nov 19, 2018

@verdurin That failure has nothing to do with this PR, there's something fishy going on on your end, let's follow up on that in #7174

@boegel
Copy link
Copy Markdown
Member

boegel commented Nov 19, 2018

Test report by @boegel
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in this PR)
node2006.delcatty.os - Linux centos linux 7.5.1804, Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz, Python 2.7.5
See https://gist.github.com/c20fe15c64305020c1d25c2266f4ff08 for a full test report.

@boegel boegel added this to the 3.8.0 milestone Nov 19, 2018
Copy link
Copy Markdown
Member

@boegel boegel left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

lgtm

@boegel
Copy link
Copy Markdown
Member

boegel commented Nov 19, 2018

Going in, thanks @bedroge!

@boegel boegel merged commit 6ede7df into easybuilders:develop Nov 19, 2018
@bedroge bedroge deleted the angsd_install_all_executables branch November 20, 2018 08:37
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Projects

None yet

Development

Successfully merging this pull request may close these issues.

3 participants