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{bio}[foss/2018b] RaGOO v1.11, intervaltree v3.0.2 w/ Python 3.6.6#8995

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pescobar:ragoo
Dec 20, 2021
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{bio}[foss/2018b] RaGOO v1.11, intervaltree v3.0.2 w/ Python 3.6.6#8995
boegel merged 5 commits intoeasybuilders:developfrom
pescobar:ragoo

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@pescobar pescobar commented Sep 25, 2019

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@boegel boegel changed the title {bio} [foss/2018b] ragoo 1.11 and deps {bio}[foss/2018b] RaGOO v1.11, intervaltree v3.0.2 w/ Python 3.6.6 Dec 19, 2021
@boegel boegel added this to the 4.x milestone Dec 19, 2021
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boegel commented Dec 19, 2021

Test report by @boegel
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
node2651.swalot.os - Linux centos linux 7.9.2009, x86_64, Intel(R) Xeon(R) CPU E5-2660 v3 @ 2.60GHz (haswell), Python 3.6.8
See https://gist.github.com/2677365e52e1c791c96232fa170a1794 for a full test report.

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rename intervaltree Python package to intervaltree-python + install i…
8e55025 
…t via PythonBundle since it also required sortedcontainers
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boegel commented Dec 19, 2021

@boegelbot please test @ generoso

@easybuilders easybuilders deleted a comment from boegelbot Dec 19, 2021
@easybuilders easybuilders deleted a comment from boegelbot Dec 19, 2021
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boegel commented Dec 19, 2021

@boegelbot please test @ generoso

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boegel commented Dec 19, 2021

Test report by @boegel
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
node3539.doduo.os - Linux RHEL 8.2, x86_64, AMD EPYC 7552 48-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/83e92832515a1e2b7451269fa4ef9818 for a full test report.

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boegelbot commented Dec 19, 2021

@boegel: Request for testing this PR well received on login1

PR test command 'EB_PR=8995 EB_ARGS= /opt/software/slurm/bin/sbatch --job-name test_PR_8995 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 7539

Test results coming soon (I hope)...

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Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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boegelbot commented Dec 19, 2021

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
cns3 - Linux rocky linux 8.4, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/d84c39d8618bc0a642faa24392ee181f for a full test report.

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boegel commented Dec 19, 2021

Test report by @boegel
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
node3108.skitty.os - Linux centos linux 7.9.2009, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz (skylake_avx512), Python 3.6.8
See https://gist.github.com/4cbcc91525ab676575300c8ac06bfc87 for a full test report.

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boegel previously approved these changes Dec 19, 2021
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lgtm

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boegel commented Dec 20, 2021

Test report by @boegel
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
node2648.swalot.os - Linux centos linux 7.9.2009, x86_64, Intel(R) Xeon(R) CPU E5-2660 v3 @ 2.60GHz (haswell), Python 3.6.8
See https://gist.github.com/dee3e95d4474a0c05f2e8900ed66920d for a full test report.

boegel
boegel approved these changes Dec 20, 2021
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lgtm

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boegel commented Dec 20, 2021

Going in, thanks @pescobar!

@boegel boegel merged commit c8f2a64 into easybuilders:develop Dec 20, 2021
@boegel boegel modified the milestones: 4.x, next release (4.5.2?) Dec 20, 2021
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