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{bio}[intel/2019b] anvio v6.1 w/ Python 3.7.4, incl. scikit-learn 0.21.3, Biopython 1.75, Pysam 0.15.3#9387

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Darkless012:20191127132955_new_pr_anvio61
Nov 29, 2019
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{bio}[intel/2019b] anvio v6.1 w/ Python 3.7.4, incl. scikit-learn 0.21.3, Biopython 1.75, Pysam 0.15.3#9387
boegel merged 7 commits intoeasybuilders:developfrom
Darkless012:20191127132955_new_pr_anvio61

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@Darkless012 Darkless012 commented Nov 27, 2019 •
edited by boegel
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(created using eb --new-pr)
requires #9399

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Comment thread easybuild/easyconfigs/a/anvio/anvio-6.1-intel-2019a-Python-3.7.2.eb Outdated
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Comment thread easybuild/easyconfigs/a/anvio/anvio-6.1-intel-2019a-Python-3.7.2.eb
@boegel boegel added this to the 4.x milestone Nov 27, 2019
@boegel boegel added the new label Nov 27, 2019
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Comment thread easybuild/easyconfigs/a/anvio/anvio-6.1-intel-2019b-Python-3.7.4.eb Outdated
@Darkless012 Darkless012 changed the title {bio}[intel/2019a] anvio v6.1 w/ Python 3.7.2 {bio}[intel/2019b] anvio v6.1 w/ Python 3.7.2 Nov 28, 2019
@Darkless012 Darkless012 changed the title {bio}[intel/2019b] anvio v6.1 w/ Python 3.7.2 {bio}[intel/2019b] anvio v6.1 w/ Python 3.7.4 Nov 28, 2019
@boegel boegel changed the title {bio}[intel/2019b] anvio v6.1 w/ Python 3.7.4 {bio}[foss/2019b,intel/2019b] anvio v6.1 w/ Python 3.7.4, incl. scikit-learn 0.21.3, Biopython 1.75, Pysam 0.15.3 Nov 28, 2019
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lgtm

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boegel commented Nov 28, 2019

@Darkless012 anvi-self-test --suite mini fails with:

Config Error: Well, in order to run this program, you need hmmscan to be installed on your
              system.

Looks like HMMER needs to be added to dependencies as well, which means another easyconfig (the Intel equivalent of HMMER-3.2.1-gompi-2019b.eb)...

@boegel boegel changed the title {bio}[foss/2019b,intel/2019b] anvio v6.1 w/ Python 3.7.4, incl. scikit-learn 0.21.3, Biopython 1.75, Pysam 0.15.3 {bio}[intel/2019b] anvio v6.1 w/ Python 3.7.4, incl. scikit-learn 0.21.3, Biopython 1.75, Pysam 0.15.3 Nov 28, 2019
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boegel commented Nov 28, 2019

Test report by @boegel
SUCCESS
Build succeeded for 10 out of 10 (10 easyconfigs in this PR)
node2412.golett.os - Linux centos linux 7.7.1908, Intel(R) Xeon(R) CPU E5-2680 v3 @ 2.50GHz, Python 2.7.5
See https://gist.github.com/48ce3e6bece519dc995e0aae15b9b1ab for a full test report.

@easybuilders easybuilders deleted a comment from boegelbot Nov 29, 2019
@easybuilders easybuilders deleted a comment from boegelbot Nov 29, 2019
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boegel commented Nov 29, 2019

Test report by @boegel
SUCCESS
Build succeeded for 10 out of 10 (10 easyconfigs in this PR)
node3169.skitty.os - Linux centos linux 7.7.1908, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, Python 3.6.8
See https://gist.github.com/0ecf15e71554ff9a75918650736dd433 for a full test report.

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lgtm

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boegel commented Nov 29, 2019

Going in, thanks @Darkless012!

@boegel boegel merged commit 5c02655 into easybuilders:develop Nov 29, 2019
@migueldiascosta migueldiascosta modified the milestones: 4.x, 4.1.0 Dec 2, 2019
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