Computational biologist working at the intersection of genomics and software.
Languages: Python, R, C/C++
- castools — command line tools for the CAS project
- regtools — integrate DNA-seq and RNA-seq data to identify regulatory mutations
- maury — R package to detect sample-swaps in NGS data
- arnav — mutation calling using a site-specific binomial model
- bam-parser-tutorial — parsing BAM files using htslib
- mpileup2readcounts — per-nucleotide read counts from samtools mpileup