Repository files navigation Sample R scripts using Rmpi
For distributed computing using MPI
Requires Rmpi package with MPI environment
In Windows, use MS-MPI
in Linux, openmpi is recommended while intel mpi or mvapich works too
Comparison of regular exhaustive search of original FSelector package with doSNOW/doMC/Rmpi implementation
doSNOW and doMC works in multicore environment within a single node
Rmpi version will work in a single or multiple nodes
The current implementation uses Iris test from FSelector documentation, and may not work in very large number of MPI ranks
Comparison of regular greedy search of original FSelector package with Rmpi implementation
The current implementation uses Iris test from FSelector documentation, and may not work in very large number of MPI ranks
In addition to splitting loops over multiple ranks, polling version is provided, as a sample work of dynamic load balancing
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