Determining a protein's three-dimensional structure is critical for understanding its function, but experimental methods like x-ray crystallography are time-consuming and expensive, making it infeasible to quickly evaluate the structure of proteins in a large scale setting. While advanced deep learning models like AlphaFold2 offer high accuracy, they require significant computational power, large training datasets, and can struggle with ``orphan" proteins or subtle mutations. Integer linear programming (ILP) methods trade off this fine-grained accuracy for a lower computational requirement, with a key advantage coming from needing no pretraining whatsoever. Here, we introduce BetaFold, an ILP-based method for predicting the structure of
kaileyhh/betafold
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