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maral96/README.md
Hey, Welcome to my github page!
  • I’m a machine learning scientist/engineer with extensive experience in applications of deep learning. I have mainly worked on supervised and unsupervised information retrieval, image segmentation and classification tasks. I implemented and evaluated several ML models in Python (Tensorflow, PyTorch, Sklearn).

Email / LinkedIn / Google Scholar

💻 Experience

Machine Learning Researcher @ Vector Institute (Sep 2021 - Jan 2022)

Semnatic Segmentation and object detection in medical images

  • Built an end-to-end AI recommendation system for x-ray image segmentation to enhance radiology diagnoses with machine learning
  • Achieved 0.74 accuracy
  • Trained UNet++ with EfficientNet-B4 backbone, two stages of training on public and private datasets
  • Data augmentations: horizontal flip, rotation, random gamma, etc
  • Loss function: combination of Dice loss and binary cross-entropy
  • Training setups: Adam optimizer, Cosine Annealing scheduling, early validation stopping, and K-fold cross-validation
  • Post-Processed images to to draw attention to suspicious areas
  • Coded in Python using Tensorflow, OpenCV, Scikit-Learn, Numpy, Pandas, etc.

pnemothorax



Graduate Student Research Assistant @ Kimia Lab (Sep 2019 - Sep 2021)

Deep learning application in medical image analysis

  • Proposed multi-magnification CBIR using features derived by deep learning
  • Implemented unsupervised hashing algorithms to increase information retrieval efficiency and statistical methods for deep feature aggregation
  • Up to 11% accuracy improvement
  • Single_vector_method_page-0001

-Binary convolutional neural networks for medical image classification; Implemented rotated binary network and evaluation measures in Python; Improved the inference speed by 10 times and memory storage by 21 times compared to the full-precision model.

RBNN_FrameWork



  • Implemented U-Net topologies for artifact removal and find ROI in pathology images
  • Achieved 0.99 accuracy: Jaccard Index=0.95, Dice Score: 0.97, Sensitivity: 0.99, Specificity: 0.99

TCGA_Challenging_Cases-1 2 Arch-1

  • Developed deep feature extractor for medical image representation using transfer learning. Improved image search accuracy by 30% compared to pre-trained DenseNet

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  1. CNN_Tensorflow CNN_Tensorflow Public

    Developing a CNN From Scratch using Tensorflow Keras, Training and Testing on CIFAR-10, with Test Accuracy of 0.89

    Jupyter Notebook