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77 repositories

i-etl
Public
Python
•
MIT License
•0•1•0•0•Updated Apr 20, 2026Apr 20, 2026
GSEACompass
Public
Run GSEA, pre-ranked GSEA, ssGSEA and GSVA and do post-analysis elaboration on the results.
electron visualization python
electron visualization python datatables gsea post-analysis
JavaScript
•
MIT License
•0•0•0•0•Updated Apr 15, 2026Apr 15, 2026
YoyoMut
Public
Repository for YoyoMut: yoyo and fixated mutations recognition and 3D protein visualization
Python
•
MIT License
•0•0•0•0•Updated Apr 1, 2026Apr 1, 2026
NCPA
Public
Unraveling the complexity of breast cancer subtype identification through nested conformal prediction analysis
Jupyter Notebook
•
GNU General Public License v3.0
•0•0•0•0•Updated Apr 1, 2026Apr 1, 2026
TNBC_mutation_analysis
Public
Source code and public data used for the project 'A machine learning framework for actionable genetic insights discovery: use in triple-negative breast cancer'.
machine-learning next-generation-sequencing feature-encoding
machine-learning next-generation-sequencing feature-encoding triple-negative-breast-cancer
Jupyter Notebook
•0•1•0•0•Updated Feb 26, 2026Feb 26, 2026
ReRa
Public
Supervised Relevance-Redundancy assessments for feature selection in omics-based classification
Jupyter Notebook
•
GNU General Public License v3.0
•0•2•0•0•Updated Jan 30, 2026Jan 30, 2026
CRIS_single-sample
Public
Single-sample classifiers for CRIS on colorectal cancer data
bioinformatics oncogenomics
bioinformatics oncogenomics
R
•
GNU General Public License v3.0
•1•5•1•0•Updated Jan 30, 2026Jan 30, 2026
open-ConvMut
Public
Python
•
MIT License
•0•0•0•0•Updated Dec 21, 2025Dec 21, 2025
open-recombinhunt
Public
Jupyter Notebook
•0•0•0•0•Updated Dec 6, 2025Dec 6, 2025
pklearn
Public
Python package for prior knowledge-guided models
Python
•0•0•0•0•Updated Nov 3, 2025Nov 3, 2025
AviFluHunt-repo
Public
Python
•
MIT License
•0•0•0•0•Updated Sep 30, 2025Sep 30, 2025
open-flu-warning
Public
Python
•0•0•0•0•Updated Sep 29, 2025Sep 29, 2025
flu-warning-system
Public
Python
•
MIT License
•1•0•0•0•Updated Aug 20, 2025Aug 20, 2025
GIS-weighted_LASSO
Public
Integrative approach to feature selection combining weighted LASSO and prior biological knowldge
lasso feature-selection classification
lasso feature-selection classification gene-expression-profiles prior-knowledge
Jupyter Notebook
•1•5•0•0•Updated May 24, 2025May 24, 2025
NMTF_for_subtyping
Public
Computational workflow for breast cancer subtyping using NMTF, node embeddings, and ML classifiers. Applied to TCGA data, as presented in CIBB 2023 (LNCS 14513)…
Python
•
Creative Commons Zero v1.0 Universal
•0•0•0•0•Updated May 13, 2025May 13, 2025
BioGAN
Public
Python
•1•1•0•1•Updated May 8, 2025May 8, 2025
prior_tree_models_repo
Public
Prior knowledge-guided tree-based models
regression feature-selection classification
regression feature-selection classification prior-knowledge gene-expression-analysis
Jupyter Notebook
•
Apache License 2.0
•0•0•0•0•Updated Apr 15, 2025Apr 15, 2025
pktree
Public
Python package for prior knowledge integration in tree-based models
Python
•
MIT License
•0•1•0•0•Updated Feb 21, 2025Feb 21, 2025
MULTI-STAR
Public
Multi-label subtyping and advanced recognition on cancer patients
Jupyter Notebook
•0•0•0•0•Updated Jan 12, 2025Jan 12, 2025
cmls2024
Public
HTML
•
MIT License
•0•0•0•0•Updated Dec 3, 2024Dec 3, 2024
ARDS_H-CPAP_ML
Public
Machine learning-based forecast of Helmet-CPAP therapy failure in Acute Respiratory Distress Syndrome patients
machine-learning covid-19 ards
machine-learning covid-19 ards predicting-h-cpap-therapy-failure-in-ards-patients h-cpap
0•0•0•0•Updated Nov 9, 2024Nov 9, 2024
CMLS
Public
HTML
•
MIT License
•0•0•0•20•Updated Jul 9, 2024Jul 9, 2024
WALS
Public
Repository for the website of the International Workshop of Web Applications for Life Sciences, co-located with ICWE 2022
HTML
•
MIT License
•0•0•0•0•Updated Jun 11, 2024Jun 11, 2024
RGMQL
Public
RGMQL: Scalable and interoperable computing of heterogeneous omics big data and metadata in R/Bioconductor
java package r
java package r bioconductor scalable-computing interopeable-computing heterogeneous-omics-data
HTML
•2•1•0•0•Updated Feb 13, 2024Feb 13, 2024
GeCo
Public
geco webpage
JavaScript
•0•0•0•6•Updated Nov 8, 2023Nov 8, 2023
nmtf-web
Public
Documentation
Python
•1•0•0•0•Updated Sep 3, 2023Sep 3, 2023
GMQL-Sync
Public
Shell
•0•0•0•2•Updated Jul 22, 2023Jul 22, 2023
TFHAZ
Public
R package to identify Transcription Factor High Accumulation DNA Zones
R
•0•0•0•0•Updated Jul 10, 2023Jul 10, 2023
Metadata-Manager
Public
Public dataset downloader for GMQL framework
dataset transformer gmql-importer
dataset transformer gmql-importer
Scala
•
Apache License 2.0
•4•7•1•7•Updated Jul 7, 2023Jul 7, 2023
DSBot
Public
Python
•3•0•1•0•Updated May 3, 2023May 3, 2023

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GeCo Team in Politecnico di Milano

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All

77 repositories

i-etl

GSEACompass

YoyoMut

NCPA

TNBC_mutation_analysis

ReRa

CRIS_single-sample

open-ConvMut

open-recombinhunt

pklearn

AviFluHunt-repo

open-flu-warning

flu-warning-system

GIS-weighted_LASSO

NMTF_for_subtyping

BioGAN

prior_tree_models_repo

pktree

MULTI-STAR

cmls2024

ARDS_H-CPAP_ML

CMLS

WALS

RGMQL

GeCo

nmtf-web

GMQL-Sync

TFHAZ

Metadata-Manager

DSBot

All

All

Repositories list

77 repositories