Repositories list

• ribs

  Public
  REST-based Interface for BioStudies

  JavaScript

  •

  Apache License 2.0

  •44 forks•11 star•00 issues•22 pull requests•Updated Apr 17, 2026Apr 17, 2026

• biostudies-index-service

  Public
  Spring Boot service for scalable Lucene indexing of BioStudies submissions with RabbitMQ real-time updates and multi-collection/EFO support

  lucenelucenesearchbiostudies

  lucenelucenesearchbiostudies

  Java

  •00 forks•11 star•00 issues•00 pull requests•Updated Apr 16, 2026Apr 16, 2026

• submission-tool

  Public
  Submission app for EMBL-EBI's BioStudies archive

  submissionbiostudies

  submissionbiostudies

  Vue

  •

  Apache License 2.0

  •11 fork•11 star•00 issues•00 pull requests•Updated Apr 15, 2026Apr 15, 2026

• biostudies-backend-services

  Public
  Repository for BioStudies backend services

  Kotlin

  •11 fork•44 stars•00 issues•22 pull requests•Updated Apr 15, 2026Apr 15, 2026

• BioStudyUISub

  Public
  Submission app for EMBL-EBI's BioStudies archive

  lesstypescriptsingle-page-app+ 6

  lesstypescriptsingle-page-appcss3angular4submissionembl-ebihmtl5biostudies

  TypeScript

  •

  Apache License 2.0

  •11 fork•11 star•00 issues•44 pull requests•Updated Jun 18, 2025Jun 18, 2025

• gff3tools

  Public
  Java

  •

  Apache License 2.0

  •11 fork•00 stars•00 issues•00 pull requests•Updated Jun 5, 2025Jun 5, 2025

• biostudies-mcp-server

  Public
  Python

  •

  Apache License 2.0

  •00 forks•11 star•00 issues•00 pull requests•Updated Mar 11, 2025Mar 11, 2025

• page-tab-specification

  Public
  Page Tab specification

  00 forks•44 stars•00 issues•00 pull requests•Updated Jan 31, 2025Jan 31, 2025

• conll-parser

  Public
  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 19, 2024Sep 19, 2024

• biostudies-backend-api-docs

  Public
  API docs specification for the BioStudies backend

  HTML

  •00 forks•00 stars•00 issues•11 pull request•Updated May 28, 2024May 28, 2024

• .github

  Public
  00 forks•11 star•00 issues•00 pull requests•Updated Jun 12, 2023Jun 12, 2023

• EBIBioStudies.github.io

  Public
  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 12, 2023Jun 12, 2023

• subs-biostudies-agent

  Public
  Java

  •

  Apache License 2.0

  •11 fork•00 stars•00 issues•00 pull requests•Updated Nov 22, 2022Nov 22, 2022

• biostudies-notebooks

  Public
  Jupyter notebooks for loading and displaying data from BioStudies

  Jupyter Notebook

  •11 fork•11 star•00 issues•11 pull request•Updated May 16, 2022May 16, 2022

• BioStd-Backend

  Public
  Bio Studies Submission backend application

  Java

  •00 forks•00 stars•00 issues•22 pull requests•Updated Sep 28, 2021Sep 28, 2021

• studies2mongo

  Public
  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 11, 2020Nov 11, 2020

• biostudies-submission-tool-components

  Public
  Component for Biostudies Submission Tool

  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 11, 2020Jun 11, 2020

• BioStudySubmProxy

  Public archive
  Java

  •11 fork•00 stars•00 issues•11 pull request•Updated Jun 18, 2019Jun 18, 2019

• Universal-link-field

  Public
  Angular-based input control for both conventional and Identifiers.org URIs

  javascriptangularvalidation+ 4

  javascriptangularvalidationtypeaheadebingx-bootstrapidentifiers-org

  TypeScript

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 6, 2018Aug 6, 2018

• FrontEndUI

  Public
  BioStudies Web Interface

  Java

  •

  Apache License 2.0

  •44 forks•00 stars•00 issues•00 pull requests•Updated Apr 19, 2018Apr 19, 2018

• bioimaging-poc

  Public
  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 16, 2018Mar 16, 2018

• SpreadsheetReaders

  Public
  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 30, 2017Oct 30, 2017

• CoreModel

  Public
  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 30, 2017Oct 30, 2017

• Commons

  Public
  Some useful staff

  Java

  •22 forks•00 stars•00 issues•00 pull requests•Updated Oct 27, 2017Oct 27, 2017

• BackendWebApp

  Public
  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 27, 2017Oct 27, 2017

• ConvertTool

  Public
  A tool for converting between different PageTab model representations (XML, JSON, XLSX, etc.)

  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 22, 2017Mar 22, 2017

• MiscTools

  Public
  BioSTD useful tools

  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 20, 2017Feb 20, 2017

• SubmitTool

  Public
  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jan 18, 2017Jan 18, 2017

• WebDAVServlet

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated May 21, 2015May 21, 2015

• PageTab2PML

  Public
  PageTab to PageML converter

  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 17, 2015Apr 17, 2015