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    82 repositories

    • MAVISp

      Public
      the MAVISp database for annotations and predictions of variant effects at the protein level
      Python
      •
      GNU General Public License v3.0
      •0•13•14•0•Updated Apr 28, 2026Apr 28, 2026

    • mavisp_data_collection

      Public
      GNU General Public License v3.0
      •0•3•27•0•Updated Apr 28, 2026Apr 28, 2026

    • mavisp_accessory_tools

      Public
      Python
      •
      GNU General Public License v3.0
      •0•1•1•1•Updated Apr 28, 2026Apr 28, 2026

    • MAVISp_automatization

      Public
      Repository for the main MAVISp data processing pipeline
      PostScript
      •
      GNU General Public License v3.0
      •0•4•6•0•Updated Apr 28, 2026Apr 28, 2026

    • cancermuts

      Public
      Software for the automatic annotation of cancer mutations
      Python
      •
      GNU General Public License v3.0
      •1•5•2•1•Updated Apr 28, 2026Apr 28, 2026

    • Moonlight2R

      Public
      MoonlightR 2.0 development repository
      R
      •0•5•4•0•Updated Apr 27, 2026Apr 27, 2026

    • MAVISp_downstream_analysis

      Public
      Repository for the downstream analysis tools of MAVISp
      Python
      •
      GNU General Public License v3.0
      •0•0•4•0•Updated Apr 24, 2026Apr 24, 2026

    • pyinteraph2

      Public
      development repository for PyInteraph2
      Python
      •
      Other
      •10•23•5•2•Updated Apr 17, 2026Apr 17, 2026

    • Mol-Analysis

      Public
      Python
      •
      GNU General Public License v3.0
      •0•3•1•0•Updated Apr 17, 2026Apr 17, 2026

    • DAA_for_Moonlight2R

      Public
      Differential abundance analysis for Moonlight2R
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Apr 9, 2026Apr 9, 2026

    • mutatex

      Public
      scripts and facilities for in-silico mutagenesis with FoldX
      Python
      •
      GNU General Public License v3.0
      •18•68•1•0•Updated Mar 9, 2026Mar 9, 2026

    • PDBminer

      Public
      scripts to find PBD structures for cancer driver proteins
      Python
      •
      GNU General Public License v3.0
      •5•31•0•0•Updated Feb 27, 2026Feb 27, 2026

    • MAVISp_allosigma2_workflow

      Public
      Workflow to process data from AlloSigma2 as done in MAVISp
      Python
      •0•1•1•0•Updated Feb 13, 2026Feb 13, 2026

    • RaSP_workflow

      Public
      Python
      •
      Apache License 2.0
      •0•2•0•0•Updated Jan 23, 2026Jan 23, 2026

    • PPI2PDB

      Public
      Python
      •0•1•0•0•Updated Jan 22, 2026Jan 22, 2026

    • RosettaDDGPrediction

      Public
      Python
      •
      GNU General Public License v3.0
      •22•87•0•0•Updated Nov 25, 2025Nov 25, 2025

    • MAVISp_EVE_pipeline

      Public
      A Snakemake pipeline for running EVE
      Python
      •0•1•2•2•Updated Sep 25, 2025Sep 25, 2025

    • MAVISp_loop_replacer

      Public
      A script designed to replace long loops in protein 3D structures with shorter versions
      Python
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Apr 11, 2025Apr 11, 2025

    • Stability_Predictors_Benchmark

      Public
      This repository contains data and scripts related to a protein stability predictor benchmark
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Mar 28, 2025Mar 28, 2025

    • Moonlight2_GMA_case_studies

      Public
      Repository for case studies in which the Gene Methylation Analysis in Moonlight2R is used
      R
      •0•0•1•0•Updated Feb 5, 2025Feb 5, 2025

    • TF_stability_for_moonlight2R

      Public
      Investigation of stability effects of mutations on transcription factors
      R
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Jan 29, 2025Jan 29, 2025

    • ALL_markers

      Public
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jan 29, 2025Jan 29, 2025

    • DCI_tombola

      Public
      0•0•0•0•Updated Dec 2, 2024Dec 2, 2024

    • MAVISp_CABSflex_pipeline

      Public
      CABSflex ensemble generation pipeline for MAVISp
      Scheme
      •
      GNU General Public License v3.0
      •0•4•1•1•Updated Nov 6, 2024Nov 6, 2024

    • MDSfit

      Public
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Aug 30, 2024Aug 30, 2024

    • LipidDyn

      Public
      repository associated to our pipeline for lipid dynamics
      Python
      •
      GNU General Public License v3.0
      •4•15•1•0•Updated Jun 17, 2024Jun 17, 2024

    • MetaD-Analysis

      Public
      Python
      •0•0•0•0•Updated Jun 12, 2024Jun 12, 2024

    • DDR-candidates

      Public
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jun 6, 2024Jun 6, 2024

    • MoonlightR

      Public
      R
      •6•17•0•0•Updated May 15, 2024May 15, 2024

    • RNA_DE_pipeline

      Public
      ngs pipeline for childhood cancer data
      Python
      •
      Other
      •0•0•9•0•Updated Feb 29, 2024Feb 29, 2024
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