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    9 repositories

    • Borrelia-WGA-Project

      Public
      Scripts and additional data generated while developing WGA protocol for Borrelia sequencing
      Python
      •1•0•0•0•Updated Dec 2, 2025Dec 2, 2025

    • Genome-Plasticity

      Public
      Scripts used for computing Flux of Genes Segments (FOGS), which enable to quantify the rate of gene acquisition or loss events within a collection of bacterial …
      Python
      •0•3•0•0•Updated Jun 5, 2025Jun 5, 2025

    • AlphaFastPPi

      Public
      Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening
      bioinformaticsprotein-structureprotein-protein-interaction
      bioinformaticsprotein-structureprotein-protein-interaction
      Python
      •
      GNU General Public License v3.0
      •3•40•2•0•Updated Sep 27, 2024Sep 27, 2024

    • cryptosporidium_parvum_evolution

      Public
      Repository containing scripts related to the research paper 'Comparative Genomics of Cryptosporidium parvum: Uncovering the Emergence of an Outbreak-Associated …
      Python
      •0•0•0•0•Updated Apr 16, 2024Apr 16, 2024

    • Bioinformatics2023

      Public
      Material for the Bioinformatics course 2022/23, Molecular Biology and Genetics, University of Pavia
      0•0•0•0•Updated Apr 5, 2024Apr 5, 2024

    • MIDIfactory

      Public
      0•0•0•0•Updated May 14, 2021May 14, 2021

    • Acb_MLST

      Public
      A collection of scripts used for performing the analyses in the manuscript: "Comparative analysis of the two Acinetobacter baumannii multilocus sequence typing …
      Python
      •0•0•0•0•Updated Mar 14, 2019Mar 14, 2019

    • NGS_HCV

      Public
      Python
      •0•0•0•1•Updated Jul 17, 2018Jul 17, 2018

    • phylo_pipe

      Public
      A pipeline to perform phylogenesis from protein sequences
      Python
      •1•0•0•0•Updated Apr 14, 2018Apr 14, 2018
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