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    10 repositories

    • kineto_stats

      Public
      HTML
      •0•0•0•0•Updated Apr 13, 2026Apr 13, 2026

    • kineto_phylo

      Public
      Supplementary scripts for kinetoplastid phylogenomics
      Shell
      •
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Mar 27, 2026Mar 27, 2026

    • Goniomonas

      Public
      HTML
      •0•0•0•0•Updated Feb 24, 2026Feb 24, 2026

    • discordances_in_phylogeny_and_morphology_within_loricate_choanoflagellates

      Public
      Code for "Looks can be deceiving: discordances in phylogeny and morphology within loricate choanoflagellates"
      Shell
      •0•0•0•0•Updated Oct 24, 2025Oct 24, 2025

    • amorphea_evolution

      Public
      Set of input and script files used in "The evolution of gene functional repertoire in Amorphea: Divergent strategies across Amoebozoa, Fungi, and Metazoa"
      R
      •0•0•0•0•Updated Sep 25, 2025Sep 25, 2025

    • Protist_barcode_MAG_correspondence

      Public
      Online Supplement to "On the relationship between protist metabarcoding and protist metagenome-assembled genomes"
      R
      •
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Sep 19, 2025Sep 19, 2025

    • delving-florenciella

      Public
      Analyzing the transcriptomes of the Florenciella genus
      R
      •0•0•0•0•Updated Aug 19, 2025Aug 19, 2025

    • transcriptome_metaT_quantification

      Public
      Small pipeline to quantify transcriptomes from a metaT
      Nextflow
      •0•0•4•0•Updated Apr 4, 2025Apr 4, 2025

    • EukProt

      Public
      Helper Perl scripts and tree files associated with the EukProt database of genome-scale eukaryotic protein sequence data sets.
      Perl
      •
      GNU General Public License v3.0
      •2•12•0•0•Updated Nov 30, 2023Nov 30, 2023

    • Ancestral-Reconstruction

      Public
      Scripts and templates to accompany "Dollo parsimony overestimates ancestral gene content reconstructions"
      Perl
      •0•1•0•0•Updated Oct 17, 2023Oct 17, 2023
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