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    122 repositories

    • deriva-ml

      Public
      modules and tools to streamline the use of derive catalogs with standard ML libraries.
      Python
      •
      Apache License 2.0
      •0•1•4•0•Updated Apr 18, 2026Apr 18, 2026

    • deriva-mcp-ui

      Public
      Browser-based chatbot interface for DERIVA
      javascriptaichatbot
      javascriptaichatbotpython-servicemcp-client
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Apr 17, 2026Apr 17, 2026

    • deriva-mcp-core

      Public
      A Model Context Protocol (MCP) server reference implementation for the DERIVA platform
      extensiblepython-servicerag
      extensiblepython-serviceragderivamcp-serverfast-mcpcredenza
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Apr 17, 2026Apr 17, 2026

    • pdb-ihm

      Public
      Deriva Protein Database Project
      Python
      •2•3•71•0•Updated Apr 17, 2026Apr 17, 2026

    • chaise

      Public
      An adaptive user interface for the Deriva platform.
      TypeScript
      •
      Apache License 2.0
      •6•10•47•5•Updated Apr 16, 2026Apr 16, 2026

    • facebase-deriva-mcp-plugin

      Public
      FaceBase plug-in for deriva-mcp-core
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Apr 16, 2026Apr 16, 2026

    • deriva-extras

      Public
      Python
      •
      Apache License 2.0
      •1•1•0•0•Updated Apr 15, 2026Apr 15, 2026

    • ErmrestDataUtils

      Public
      JavaScript
      •
      Apache License 2.0
      •0•2•5•1•Updated Apr 15, 2026Apr 15, 2026

    • ermrestjs

      Public
      ERMrest client library in JavaScript
      JavaScript
      •
      Apache License 2.0
      •3•5•27•2•Updated Apr 15, 2026Apr 15, 2026

    • deriva-docker

      Public
      Containerized DERIVA stack using Docker and Docker Compose
      Shell
      •
      Apache License 2.0
      •0•0•0•0•Updated Apr 15, 2026Apr 15, 2026

    • deriva-webapps

      Public
      Deriva-based web applications
      JavaScript
      •
      Apache License 2.0
      •1•2•16•0•Updated Apr 14, 2026Apr 14, 2026

    • webauthn

      Public
      feature branch for getting GO groups as attributes
      Python
      •
      Apache License 2.0
      •1•3•10•1•Updated Apr 7, 2026Apr 7, 2026

    • ermrest

      Public
      ERMrest (rhymes with "earn rest") is a general relational data storage service for web-based, data-oriented collaboration.
      Python
      •
      Apache License 2.0
      •5•5•13•1•Updated Apr 7, 2026Apr 7, 2026

    • deriva-web

      Public
      Auxiliary REST Web Services for DERIVA
      Python
      •
      Apache License 2.0
      •0•0•2•0•Updated Apr 7, 2026Apr 7, 2026

    • deriva-py

      Public
      Python modules for the DERIVA platform
      Python
      •
      Apache License 2.0
      •4•6•25•2•Updated Apr 7, 2026Apr 7, 2026

    • ermresolve

      Public
      A trivial identifier resolver and redirect service to help cite entities in an ERMrest catalog
      Python
      •
      Apache License 2.0
      •0•0•4•0•Updated Apr 7, 2026Apr 7, 2026

    • hatrac

      Public
      Simple object storage for collaborations
      Python
      •
      Apache License 2.0
      •1•4•7•2•Updated Apr 7, 2026Apr 7, 2026

    • deriva-skills

      Public
      Claude Code skills plugin for Deriva catalogs and DerivaML workflows
      Python
      •0•0•0•0•Updated Apr 4, 2026Apr 4, 2026

    • deriva-mcp

      Public
      Python
      •0•0•0•0•Updated Apr 4, 2026Apr 4, 2026

    • credenza

      Public
      OIDC / OAuth2 Session Broker
      pythonflaskauthentication
      pythonflaskauthenticationsession-managementoauth2-serverdevice-flowoidcoauth2-clientpkceoidc-client
      Python
      •
      Apache License 2.0
      •1•1•0•2•Updated Apr 3, 2026Apr 3, 2026

    • deriva-docs

      Public
      Top-level documentation for DERIVA software
      Python
      •0•0•7•0•Updated Apr 3, 2026Apr 3, 2026

    • imagetools

      Public
      Misc scripts for managing images destined for cantaloupe image server
      Python
      •0•0•9•0•Updated Apr 2, 2026Apr 2, 2026

    • deriva-imaging-pipeline

      Public
      Tools and configuration for the DERIVA imaging pipeline
      Python
      •
      Apache License 2.0
      •0•0•1•0•Updated Apr 2, 2026Apr 2, 2026

    • deriva-ml-model-template

      Public template
      Example of How to Setup DerivaML project
      Python
      •2•0•0•0•Updated Apr 1, 2026Apr 1, 2026

    • facebase-docs

      Public
      Data curation for FaceBase
      0•1•17•0•Updated Apr 1, 2026Apr 1, 2026

    • facebase-ml

      Public
      Repository for deriva-ml classes extended for the FaceBase data repository
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Mar 28, 2026Mar 28, 2026

    • openseadragon-viewer

      Public
      2D viewer with openseadragon
      JavaScript
      •
      Apache License 2.0
      •2•5•10•0•Updated Mar 26, 2026Mar 26, 2026

    • deriva-ml-apps

      Public
      Web applications for exploring Deriva catalogs and DerivaML workflows
      TypeScript
      •0•0•0•0•Updated Mar 21, 2026Mar 21, 2026

    • deriva-client-bundle

      Public
      Binary distributions of DERIVA Client Tools
      installersderiva
      installersderiva
      Python
      •
      GNU General Public License v3.0
      •0•1•0•1•Updated Mar 5, 2026Mar 5, 2026

    • atlas-d2k-www

      Public
      Static site (Jekyll) code for the landing site for ATLAS-D2L (www.atlas-d2k.org)
      HTML
      •0•0•8•0•Updated Feb 19, 2026Feb 19, 2026
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