Repositories list

• BM327-Workshop-2

  Public
  Bioinformatics Workshop 2 for BM327 Microbiology

  ggplot2bioinformaticsteaching+ 3

  ggplot2bioinformaticsteachingdata-analysismicrobiologyr-language

  Lua

  •

  Creative Commons Attribution Share Alike 4.0 International

  •00 forks•00 stars•33 issues•00 pull requests•Updated Mar 20, 2026Mar 20, 2026

• BM211-Workshop-5

  Public
  Materials for the BM211 phylogenetics workshop

  JavaScript

  •

  Creative Commons Attribution Share Alike 4.0 International

  •00 forks•00 stars•44 issues•00 pull requests•Updated Mar 10, 2026Mar 10, 2026

• BM214-Workshop-3

  Public
  Bacterial/bacteriophage enumeration bioinformatics workshop for BM214 (Being a Biomolecular Scientist 2)

  Jupyter Notebook

  •

  Creative Commons Attribution Share Alike 4.0 International

  •00 forks•00 stars•11 issue•00 pull requests•Updated Mar 10, 2026Mar 10, 2026

• BM214-Workshop-2

  Public
  Sequence searching bioinformatics workshop for BM214 (Being a Biomolecular Scientist 2)

  TeX

  •

  Creative Commons Attribution Share Alike 4.0 International

  •00 forks•00 stars•77 issues•00 pull requests•Updated Mar 6, 2026Mar 6, 2026

• MP968-Workshop_Experimental_Design

  Public
  MP968 Experimental Design workshop

  statisticsexperimental-design

  statisticsexperimental-design

  Lua

  •

  Creative Commons Attribution Share Alike 4.0 International

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 23, 2026Feb 23, 2026

• BM211-Workshop-1

  Public
  BM211 workshop materials

  bioinformaticsworkshopcomputational-biology+ 3

  bioinformaticsworkshopcomputational-biologyteachingtextbookmicrobial-ecology

  TeX

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 10, 2026Feb 10, 2026

• BM327-Workshop-1

  Public
  Bioinformatics Workshop 1 for BM327 Microbiology

  bioinformaticsmicrobiologypseudomonas-aeruginosa+ 2

  bioinformaticsmicrobiologypseudomonas-aeruginosanosocomial-infectionspseudomonas

  Lua

  •

  Creative Commons Attribution Share Alike 4.0 International

  •00 forks•00 stars•22 issues•00 pull requests•Updated Feb 9, 2026Feb 9, 2026

• sipbs-internships

  Public
  Website in support of SIPBS internship matching

  CSS

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 9, 2026Feb 9, 2026

• .github

  Public
  Public README.md for sipbs-compbiol

  00 forks•00 stars•00 issues•00 pull requests•Updated Jan 20, 2026Jan 20, 2026

• BM329_Block_A_workshop

  Public
  Material for the BM329 (Biomedical Microbiology) Block A workshop on microbial identification.

  bioinformaticsmicrobial-identificationmicrobial-classification+ 1

  bioinformaticsmicrobial-identificationmicrobial-classificationbiomedical-microbiology

  TeX

  •

  Creative Commons Attribution Share Alike 4.0 International

  •00 forks•11 star•1313 issues•00 pull requests•Updated Jan 14, 2026Jan 14, 2026

• little-data-analysis-book

  Public
  A little book about data analysis. Continually in progress.

  data-sciencestatisticsbiostatistics+ 1

  data-sciencestatisticsbiostatisticsdata-analysis

  JavaScript

  •

  Creative Commons Attribution Share Alike 4.0 International

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jan 13, 2026Jan 13, 2026

• bm432-project

  Public
  Support for BM432 students doing their final year project in the SIPBS CompBiol Group

  CSS

  •

  Creative Commons Attribution Share Alike 4.0 International

  •11 fork•11 star•11 issue•00 pull requests•Updated Nov 25, 2025Nov 25, 2025

• MP968-Workshop_Experimental_Design_Slides

  Public
  Slides for the MP968 experimental design workshop

  JavaScript

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 24, 2025Nov 24, 2025

• 2025-11-04-strathclyde

  Public
  Webpage for the 4th-5th November in-person Carpentries course presentation for IBioIC at the University of Strathclyde

  workshopdata-carpentrysoftware-carpentry+ 3

  workshopdata-carpentrysoftware-carpentrycarpentriesstrathclydeibioic

  HTML

  •

  Other

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 5, 2025Nov 5, 2025

• bm432-datavis_workshop

  Public
  BM432 data visualisation flipped classroom workshop slides

  data-visualizationteachingscientific-visualization+ 2

  data-visualizationteachingscientific-visualizationscicommbm432

  Lua

  •

  Creative Commons Attribution Share Alike 4.0 International

  •00 forks•00 stars•44 issues•00 pull requests•Updated Oct 24, 2025Oct 24, 2025

• BM425-Workshop-1

  Public
  SARS-CoV-2 genomics bioinformatics workshop for BM425 (Advanced Microbiology)

  JavaScript

  •

  Creative Commons Attribution Share Alike 4.0 International

  •00 forks•00 stars•22 issues•00 pull requests•Updated Sep 19, 2025Sep 19, 2025

• sipbscompbiol-pda

  Public
  GitHub Pages site to support PDAs mentored by the SIPBS Computational Biology group

  supportstudentsadvice+ 1

  supportstudentsadvicestrathclyde

  HTML

  •

  Creative Commons Attribution Share Alike 4.0 International

  •00 forks•11 star•11 issue•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• sipbs-compbiol-book-template

  Public template
  GitHub repository template for SIPBS CompBiol-formatted Quarto books

  teachingquartoquarto-template

  teachingquartoquarto-template

  JavaScript

  •

  Creative Commons Attribution Share Alike 4.0 International

  •11 fork•00 stars•22 issues•00 pull requests•Updated Sep 3, 2025Sep 3, 2025

• BM954-Project

  Public
  This repository provides a website to support MSc students in the SIPBSCompBiol group

  CSS

  •

  Creative Commons Attribution Share Alike 4.0 International

  •00 forks•00 stars•11 issue•00 pull requests•Updated Jul 9, 2025Jul 9, 2025

• 2025-06-16-strathclyde

  Public
  Carpentries website for presentation in SIPBS, June 2025

  HTML

  •

  Other

  •11 fork•00 stars•00 issues•00 pull requests•Updated Jun 17, 2025Jun 17, 2025

• BM425-Workshop-2

  Public
  Bioinformatics workshop for BM425 (Advanced Microbiology)

  Lua

  •

  Creative Commons Attribution Share Alike 4.0 International

  •00 forks•00 stars•11 issue•00 pull requests•Updated May 13, 2025May 13, 2025

• BM329_Block_D_Workshop

  Public
  Quarto pages for BM329 Workshop B materials

  TeX

  •

  Creative Commons Attribution Share Alike 4.0 International

  •11 fork•00 stars•44 issues•00 pull requests•Updated Mar 24, 2025Mar 24, 2025

• sipbs-compbiol.github.io

  Public
  Website/blog for SIPBS Computational Biology group

  JavaScript

  •

  MIT License

  •27k27k forks•00 stars•00 issues•00 pull requests•Updated Jan 20, 2025Jan 20, 2025

• Kiepas_et_al_2024_16S

  Public
  microbial-genomicssupplementary-datasupplementary-material+ 3

  microbial-genomicssupplementary-datasupplementary-materialstreptomycesmicrobial-taxonomysupplementary-information

  Jupyter Notebook

  •

  Other

  •11 fork•22 stars•00 issues•00 pull requests•Updated Aug 28, 2024Aug 28, 2024

• StudentResources

  Public
  library of resources to support student learning in bioinformatics/biological sciences

  00 forks•00 stars•11 issue•00 pull requests•Updated Apr 8, 2024Apr 8, 2024

• MP429

  Public
  Materials for MP429 course workshops in statistics, delivered at University of Strathclyde

  HTML

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 22, 2024Feb 22, 2024

• 2023-12-08_3Rs_presentation

  Public
  Statistical advice presentation for 3Rs meeting, 2023-12-08

  JavaScript

  •00 forks•11 star•00 issues•00 pull requests•Updated Dec 4, 2023Dec 4, 2023

• little-bioinformatics-book

  Public
  A little book about bioinformatics. Continually in progress

  bioinformaticscomputational-biologytextbook

  bioinformaticscomputational-biologytextbook

  TeX

  •00 forks•00 stars•11 issue•00 pull requests•Updated Nov 21, 2023Nov 21, 2023

• sipbs-compbiol

  Public
  Welcome README for sipbs-compbiol group

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 10, 2022Dec 10, 2022

• BM432

  Public
  Online reading material for BM432 course workshops in data management, analysis and visualisation, delivered at University of Strathclyde

  data-sciencerstatistics+ 2

  data-sciencerstatisticsdata-visualisationdata-analysis

  HTML

  •

  Creative Commons Attribution Share Alike 4.0 International

  •11 fork•22 stars•22 issues•00 pull requests•Updated Nov 18, 2022Nov 18, 2022