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    17 repositories

    • mars-fm

      Public
      Python
      •
      MIT License
      •3•22•0•0•Updated Apr 16, 2026Apr 16, 2026

    • VCR-Agent

      Public
      Implementation of VCR-Agent, the multi-agent explanation system for virtual cells described in Towards Autonomous Mechanistic Reasoning in Virtual Cells (arXiv:…
      Python
      •0•3•1•0•Updated Apr 15, 2026Apr 15, 2026

    • microscopy-flow-matching

      Public
      Elucidating the Design Space of Flow Matching for Cellular Microscopy
      Python
      •
      Apache License 2.0
      •0•2•0•0•Updated Mar 25, 2026Mar 25, 2026

    • TxPert

      Public
      A repository for reproducing experiments from the TxPert paper
      Python
      •
      Other
      •4•26•1•0•Updated Mar 25, 2026Mar 25, 2026

    • hooke

      Public
      Hooke: ML models for biological perturbation prediction
      1•0•2•1•Updated Mar 13, 2026Mar 13, 2026

    • safe-oxidizer

      Public
      Pure rust implementation of SAFE. Entirely written by Claude Code.
      Rust
      •0•0•0•0•Updated Mar 6, 2026Mar 6, 2026

    • OpenQDC

      Public
      Repository of Quantum Datasets Publicly Available
      Python
      •
      Other
      •6•60•9•1•Updated Jun 19, 2025Jun 19, 2025

    • mood-experiments

      Public
      Molecular Out-Of-Distribution
      Jupyter Notebook
      •3•39•0•0•Updated Apr 16, 2025Apr 16, 2025

    • .github

      Public
      0•0•0•0•Updated Nov 26, 2024Nov 26, 2024

    • unimodality_pipeline

      Public
      Pipeline for training models for the unimodality project
      Python
      •0•0•0•0•Updated Nov 7, 2024Nov 7, 2024

    • Tx-Evaluation

      Public
      Bencharking pipeline for evaluating Transcriptomic representations for perturbation tasks
      Python
      •
      Apache License 2.0
      •1•12•1•0•Updated Nov 5, 2024Nov 5, 2024

    • smiles-rnn

      Public
      Baseline for Safe-setup project. Originally forked from https://github.com/MorganCThomas/SMILES-RNN/tree/main and adapted.
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Sep 3, 2024Sep 3, 2024

    • prop-score-pairing

      Public
      Jupyter Notebook
      •1•9•0•0•Updated Aug 12, 2024Aug 12, 2024

    • mtl_summer_school_2024

      Public
      Jupyter Notebook
      •14•49•1•0•Updated Jun 18, 2024Jun 18, 2024

    • M2D2-meetings

      Public archive
      Website page: Montreal AI for Drug Discovery meetings
      JavaScript
      •
      Other
      •0•1•0•0•Updated Sep 11, 2022Sep 11, 2022

    • lapool

      Public archive
      Python
      •2•7•0•0•Updated Feb 16, 2021Feb 16, 2021

    • adkl

      Public archive
      Code base for Adaptive Deep Kernel Learning
      Python
      •1•4•0•0•Updated Sep 26, 2019Sep 26, 2019
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