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Commits on Mar 8, 2026

• Bump version: 0.30.0 → 0.30.1

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  53209ad

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• update linux kallisto binaries

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  5d25130

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• another style fix

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  b66bc48

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• more styling

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  7e19af2

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• Fix

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  8b748d0

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• fix some tests

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  83ae0d1

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• fix some lint

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  6709071

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Commits on Jan 30, 2026

• Optimize validation, matrix operations, reference generation, and process handling

  svdrecbd

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  7005275

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Commits on Oct 27, 2025

• Bump version: 0.29.5 → 0.30.0

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  0391b45

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Commits on Oct 23, 2025

• Add --cellranger, --gzip, --delete-bus, and --genomebam/--cram support

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  cce7a4d

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Commits on May 27, 2025

• Bump version: 0.29.4 → 0.29.5

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Commits on May 11, 2025

• Bump version: 0.29.3 → 0.29.4

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  a76377b

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Commits on Apr 25, 2025

• Bump version: 0.29.2 → 0.29.3

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  a45822f

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• temporary adjustment to 10xv4

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  a0df33a

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• style

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  31080ec

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• lint

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  a117393

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• fix

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  8315354

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• --exact-barcodes and -g None

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  bd63bfe

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• add 10xv4

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  319b8e9

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• Update bustools binaries to bustools v0.45.0

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  62a86ed

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Commits on Mar 20, 2025

• run yapf

  josephrich98

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  2b4764e

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• bump version

  josephrich98

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  32cefd0

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Commits on Mar 17, 2025

• slightly modified h5ad code to lower RAM spike when dealing with a large number of genes

  josephrich98

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  7779857

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Commits on Oct 21, 2024

• Bump version: 0.29.0 → 0.29.1

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  fefa701

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• fix lint

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  e43dc87

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• update download_reference to support k=63

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  a239c12

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• have --dry-run show the proper binaries

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  7a985c3

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• add no-opt binary fallback; allow -i NONE for nac

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  b89239c

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• Allow specifying -i NONE to skip kallisto index creation

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  c3665bb

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• update bustools binaries to 0.44.1

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  9f5bbc5

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Commits on Oct 9, 2024

• Bump version: 0.28.2 → 0.29.0

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  a03279a

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• style fix

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  4b4a8e1

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• fix

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  a351f2e

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Commits on Oct 8, 2024

• space

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  ad33569

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• tab

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  ef2bef0

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