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Rat Genome Database

7 followers
rgd.web@mcw.edu

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rgd-core-library rgd-core-library Public

Domain layer and shared components

Java
rgd-web-application rgd-web-application Public

Code used by the RGD web site and tools

JavaScript 2
rgd-web-services rgd-web-services Public

Swagger implementation

Java
rgd-annotation-files rgd-annotation-files Public

GO annotation files in GAF, GPAD and GPI format

Repositories

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Showing 10 of 154 repositories

update-terms-in-full-annot-pipeline Public
Internal QC pipeline for FULL_ANNOT table: updates term names and aspects.

rat-genome-database/update-terms-in-full-annot-pipeline’s past year of commit activity

Java 0 GPL-3.0 0 0 0 Updated Mar 24, 2026
qtl-rso-annotation-pipeline Public

rat-genome-database/qtl-rso-annotation-pipeline’s past year of commit activity

Java 0 GPL-3.0 0 0 0 Updated Mar 24, 2026
CMO-Clinical-Measurement-Ontology Public
Clinical Measurement Ontology (CMO) maintained by RGD

rat-genome-database/CMO-Clinical-Measurement-Ontology’s past year of commit activity

3 4 9 2 Updated Mar 24, 2026
strain-vt-annotation-pipeline Public
propagates VT annotations from QTLs to associated strains

rat-genome-database/strain-vt-annotation-pipeline’s past year of commit activity

Java 0 GPL-3.0 0 0 0 Updated Mar 24, 2026
rgd-web-application Public
Code used by the RGD web site and tools

rat-genome-database/rgd-web-application’s past year of commit activity

JavaScript 2 GPL-3.0 0 0 2 Updated Mar 24, 2026
gene-description-pipeline Public
Generate gene descriptions for rat, mouse nad human based on automated gene synopses from AGR merged with automated gene synopses from RGD.

rat-genome-database/gene-description-pipeline’s past year of commit activity

Java 0 GPL-3.0 0 0 0 Updated Mar 24, 2026
RDO-Disease-Ontology Public

rat-genome-database/RDO-Disease-Ontology’s past year of commit activity

0 0 1 0 Updated Mar 24, 2026
omim-annotation-pipeline Public
Loads OMIM ids and then creates OMIM disease annotations.

rat-genome-database/omim-annotation-pipeline’s past year of commit activity

Java 2 GPL-3.0 0 0 0 Updated Mar 24, 2026
RS-Rat-Strain-Ontology Public
Rat strain ontology maintained by RGD

rat-genome-database/RS-Rat-Strain-Ontology’s past year of commit activity

0 2 0 1 Updated Mar 24, 2026
XCO-Experimental-Condition-Ontology Public
Experimental Condition Ontology maintained by RGD

rat-genome-database/XCO-Experimental-Condition-Ontology’s past year of commit activity

2 2 0 1 Updated Mar 24, 2026

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