Pinned Loading

1. metagenomic-pipeline metagenomic-pipeline Public

   End to end metagenomic pipeline for complex microbiome datasets

   1

2. genomic_data_science genomic_data_science Public

   Genomic data analysis files and tools for processing Arabidopsis thaliana sequencing data

   Shell

3. docker_image_setup docker_image_setup Public

   Setting up docker image for reproducible analysis

   1

4. variant-core variant-core Public

   A memory-optimized, strictly-typed genomic parser for clinical pipelines

   Python

5. stjude-biohackathon/KIDS25-Team21 stjude-biohackathon/KIDS25-Team21 Public

   Collaborated on building a chatbot for St. Jude Children's Research Hospital at BioHackathon to to assist lab personnel with quickly referencing lab procedures.

   Python

6. scalable-prs-pipeline scalable-prs-pipeline Public

   A scalable, end-to-end Nextflow DSL2 bioinformatics pipeline for computing Polygenic Risk Scores (PRS) from VCF data, including automated QC, imputation, scoring, and clinical visualization.

   HTML