This repository contains the data parse and statistical analysis made on publicly available SARS-Cov2 genomes deposited in GISAID. Additional covariates integrated to that genome data are also provided in /data (see readme.md).

Contributions:

Repo: TB PV

Data and covariates collection and integration: TB AA SB PV

Patient data outcome : PV DM RK (currently not added)

Genome data pipeline and data parse: AA PV

Data Analysis: AA SB TB PV RK

Conceptualization AA SB TB RK PV

A workflowr project.