| Name | GISAID ID | Region | GB File Source | Mut File Source |
|---|---|---|---|---|
| BA.1 | EPI_ISL_10000028 | RBD | BA.1.gb | final_variant_scores.csv |
| BA.2 | EPI_ISL_10000005 | RBD | BA.2_rbd.gb | final_variant_scores.csv |
| BA.2 | EPI_ISL_10000005 | Spike | BA.2_spike.gb | mut_BA.2_spike.csv |
| BA.2.75 | EPI_ISL_13302209 | RBD | NA | mut_BA.2.75_rbd.csv |
| BA.4_BA.5 | EPI_ISL_11207535 | RBD | NA | mut_BA.4_BA.5_rbd.csv |
| JN.1 | EPI_ISL_18373905 | RBD | NA | downloaded and unpacked from Zenodo |
| KP.2 | EPI_ISL_18916251 | RBD | NA | downloaded and unpacked from Zenodo |
| KP.3 | EPI_ISL_19036766 | RBD | NA | downloaded and unpacked from Zenodo |
| XBB.1.5 | EPI_ISL_17054053 | RBD | XBB.1.5_rbd.gb | mut_XBB.1.5_rbd.csv |
| XBB.1.5 | EPI_ISL_17054053 | Spike | XBB.1.5_spike.gb | mut_XBB.1.5_spike.csv |
| Name | Metric | Region | Source |
|---|---|---|---|
| Hu-1, BA.1, BA.2 | DMS | RBD | final_variant_scores.csv |
| Hu-1 | EVEscape | Spike | Hu-1_eve |
| BA.2 | DMS | Spike | BA.2_spike_dms |
| XBB.1.5 | DMS | RBD | XBB.1.5_rbd_dms |
| XBB.1.5 | DMS | Spike | XBB.1.5_spike_dms |
| XBB.1.5 | EVEscape | Spike | XBB.1.5_spike_eve |
| KP.3 | DMS, EVEscape | Spike | KP.3_spike_dms_eve_monoclonal, KP.3_spike_dms_eve_polyclonal |
| NA | Escape | RBD | site-level_escape_across_antibody |
See pdf file for reference: DMS Souce