Source Files

skmstore.hpp (use MoodyCamel concurrent queue to store skm chunks)

RADULS

use_raduls.h
libraduls.so

comp_and_sawp.h
defs.h
exceptions.h
raduls.h
record.h
small_sort.h
sorting_network.cpp
sorting_network.h

concurrent_queue.h

Name		Name	Last commit message	Last commit date
Latest commit History 106 Commits
.vscode		.vscode
.gitignore		.gitignore
CMakeLists.txt		CMakeLists.txt
baselines.py		baselines.py
concqueue.hpp		concqueue.hpp
concurrent_queue.h		concurrent_queue.h
cpu_funcs.cpp		cpu_funcs.cpp
cpu_funcs.h		cpu_funcs.h
fileloader.hpp		fileloader.hpp
gkc_main.cpp		gkc_main.cpp
gpu_hash_counter.cu		gpu_hash_counter.cu
gpu_kmercounting.cu		gpu_kmercounting.cu
gpu_kmercounting.h		gpu_kmercounting.h
gpu_skmgen.cu		gpu_skmgen.cu
gpu_skmgen.h		gpu_skmgen.h
libraduls.so		libraduls.so
minimizer_filter.h		minimizer_filter.h
read_loader_V2.hpp		read_loader_V2.hpp
readme.md		readme.md
skmstore.hpp		skmstore.hpp
thread_pool.hpp		thread_pool.hpp
types.h		types.h
use_raduls.h		use_raduls.h
utilities.hpp		utilities.hpp