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Baysor preview command is executing successfully but run command raises file format error

Status: Open.

#177 In kharchenkolab/Baysor;

· atulkumar1301 opened on Feb 19, 2026

Baysor preview crashes with high -m

Status: Open.

#176 In kharchenkolab/Baysor;

· stephlo76 opened on Jan 27, 2026

Large Xenium dataset -Killed during Estimating noise level

Status: Open.

#175 In kharchenkolab/Baysor;

· kristiajazi opened on Jan 12, 2026

save_segmentation_results failing for some FOVs

Status: Open.

#174 In kharchenkolab/Baysor;

· sam-mick opened on Dec 4, 2025

segfree methods?

Status: Open.

#173 In kharchenkolab/Baysor;

· oghzzang opened on Oct 15, 2025

Baysor segmentation on Xenium 5k data

Status: Open.

#172 In kharchenkolab/Baysor;

· Rapamycin-s opened on Oct 8, 2025

Filtering out transcripts based on baysor confidence and assignment confidence output

Status: Open.

#171 In kharchenkolab/Baysor;

· pngai-uc opened on Oct 3, 2025

Warning: To many values of z (143371). Binning z-stack into 10 layers for polygon estimation.

Status: Open.

#169 In kharchenkolab/Baysor;

· Yifan-debug opened on Jul 15, 2025

Killed After Initializing Algorithm?

Status: Open.

#168 In kharchenkolab/Baysor;

· matthew-evrard opened on Jul 12, 2025

Cannot download examples

Status: Open.

#166 In kharchenkolab/Baysor;

· mcahn opened on May 5, 2025

Xeniumranger EmptyCellsError

Status: Open.

#165 In kharchenkolab/Baysor;

· Laolga opened on Apr 30, 2025

How to pass arguments containing minus signs

Status: Open.

#164 In kharchenkolab/Baysor;

· mcahn opened on Apr 28, 2025