Repositories list

• CMEnt

  Public
  Characterization of Methylation using positional ENTanglement (previously called DMRsegal)

  R

  •

  GNU General Public License v2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 24, 2026Apr 24, 2026

• DMRsegaldata

  Public
  DMRsegal example data package

  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 2, 2026Apr 2, 2026

• RBedMethyl

  Public
  Bioconductor-native infrastructure for handling large nanoporetech modkit bedMethyl pileup files from ONT data using HDF5Array and DelayedArray.

  R

  •

  GNU General Public License v2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 25, 2026Mar 25, 2026

• TAA_somatic_snakemake

  Public
  This pipeline will process the files after deep WES, to see if there are any mutations in the somatic cells. It will at the end of the pipeline use multiple spe…

  cardio

  cardio

  Python

  •

  MIT License

  •11 fork•00 stars•00 issues•00 pull requests•Updated Sep 9, 2025Sep 9, 2025

• blt-meth2rna

  Public
  Code for BLT research paper

  Python

  •

  Other

  •193193 forks•00 stars•00 issues•00 pull requests•Updated May 22, 2025May 22, 2025

• cardio_CRISPR_NGS_pipeline

  Public
  This pipeline is a copy of the pipeline on bitbucket with additions about how to use this pipelines for human cells.

  cardio

  cardio

  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 5, 2025May 5, 2025