All

22 repositories

MultiQC
Public
Aggregate results from bioinformatics analyses across many samples into a single report.
python bioinformatics quality-control
python bioinformatics quality-control analysis reporting pypi data-visualization bioconda multiqc vizualisation
JavaScript
•
GNU General Public License v3.0
•656•1.4k•225•75•Updated Apr 19, 2026Apr 19, 2026
stats
Public
Automated statistics for MultiQC contributions
Python
•
MIT License
•0•1•0•0•Updated Apr 19, 2026Apr 19, 2026
test-data
Public
Test data for MultiQC.
bioinformatics multiqc test-data
bioinformatics multiqc test-data bioinformatics-data
HTML
•
MIT License
•157•24•0•15•Updated Mar 20, 2026Mar 20, 2026
logo
Public
MultiQC logo and branding information
logo multiqc colours
logo multiqc colours branding
0•0•0•0•Updated Mar 4, 2026Mar 4, 2026
MultiQC_SAV
Public
MultiQC plugin replicating the most used plots and tables from Illumina's SAV
Python
•
MIT License
•3•10•3•1•Updated Dec 18, 2025Dec 18, 2025
xenium-extra
Public
Additional MultiQC report sections for 10x Genomics Xenium data.
multiqc single-cell 10xgenomics
multiqc single-cell 10xgenomics multiqc-plugin xenium
Python
•
MIT License
•0•1•0•0•Updated Dec 18, 2025Dec 18, 2025
api.multiqc.info
Public
Code for basic MultiQC API service, providing run-time information about available updates.
api multiqc
api multiqc
Python
•
MIT License
•1•0•1•4•Updated Dec 18, 2025Dec 18, 2025
evals
Public
Comparing formats, stores, and query engines for MegaQC
Jupyter Notebook
•0•0•0•0•Updated Jun 19, 2025Jun 19, 2025
example-timeline
Public
Example of usig MultiQC parquet intermediate files to plot timelines across many runs
Jupyter Notebook
•0•0•0•0•Updated May 30, 2025May 30, 2025
example-streamlit
Public
Example of using MultiQC within a Streamlit app
Python
•2•0•0•0•Updated May 19, 2025May 19, 2025
example-notebook
Public
Example of using MultiQC within a Jupyter Notebook
HTML
•
MIT License
•2•2•1•1•Updated Apr 29, 2025Apr 29, 2025
example-plugin
Public template
A miniature example of a MultiQC plugin.
python plugin quality-control
python plugin quality-control ngs next-generation-sequencing multiqc example-project multiqc-plugin
Python
•
MIT License
•6•8•1•0•Updated Feb 13, 2025Feb 13, 2025
.github
Public
Apache License 2.0
•0•0•0•0•Updated Feb 13, 2025Feb 13, 2025
MegaQC
Public
Web application to collect and visualise data across multiple MultiQC runs.
Python
•
GNU General Public License v3.0
•29•94•89•33•Updated Dec 13, 2024Dec 13, 2024
website
Public archive
Website files for MultiQC
website multiqc
website multiqc
HTML
•
MIT License
•1•2•0•0•Updated Dec 8, 2024Dec 8, 2024
MegaQC_website
Public
Website files for MegaQC.
SCSS
•
Other
•1•1•2•0•Updated Dec 19, 2023Dec 19, 2023
MultiQC_NGI
Public
MultiQC plugin for the National Genomics Infrastructure in Stockholm, Sweden.
python bioinformatics analysis
python bioinformatics analysis multiqc
Python
•
MIT License
•11•4•0•0•Updated Aug 4, 2023Aug 4, 2023
custom_images_tsv
Public
Plugin to insert images in a MultiQC report
Python
•1•0•0•0•Updated Aug 23, 2021Aug 23, 2021
MultiQC_bcbio
Public
MultiQC plugin for bcbio_nextgen pipeline
Python
•
MIT License
•4•10•0•0•Updated Oct 29, 2020Oct 29, 2020
MultiQC_Clarity
Public
MultiQC plugin interacting with the Illumina Genologics Clarity LIMS
bioinformatics lims sequencing
bioinformatics lims sequencing next-generation-sequencing multiqc illumina clarity genologics
Python
•
MIT License
•5•1•2•0•Updated Feb 14, 2019Feb 14, 2019
OSXApp
Public archive
Files and config for OS X wrapper around MultiQC. See https://github.com/ewels/MultiQC
Python
•
MIT License
•0•0•0•0•Updated Mar 3, 2016Mar 3, 2016
publication
Public archive
Source for paper describing MultiQC. See main repository here: https://github.com/ewels/MultiQC
HTML
•0•0•0•0•Updated Jan 5, 2016Jan 5, 2016

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MultiQC

All

All

22 repositories

MultiQC

stats

test-data

logo

MultiQC_SAV

xenium-extra

api.multiqc.info

evals

example-timeline

example-streamlit

example-notebook

example-plugin

.github

MegaQC

website

MegaQC_website

MultiQC_NGI

custom_images_tsv

MultiQC_bcbio

MultiQC_Clarity

OSXApp

publication

All

All

Repositories list

22 repositories