All

18 repositories

rfam-docs
Public
Rfam documentation and help hosted on ReadTheDocs
documentation sphinx readthedocs
documentation sphinx readthedocs rst ncrna rfam
Apache License 2.0
•9•6•0•4•Updated Apr 16, 2026Apr 16, 2026
rfam-family-pipeline
Public
Backend for the Rfam family building pipeline
bioinformatics perl ncrna
bioinformatics perl ncrna
Perl
•2•3•20•2•Updated Apr 15, 2026Apr 15, 2026
rfam-seed-qc
Public
Validation and quality control toolkit for Rfam Stockholm multiple sequence alignments
rna multiple-sequence-alignment rfam
rna multiple-sequence-alignment rfam stockholm-format
Python
•
Apache License 2.0
•1•0•1•0•Updated Apr 13, 2026Apr 13, 2026
ncrnannotator
Public
nf-core pipeline for genome-level ncRNA annotation using Infernal
Nextflow
•
MIT License
•1•0•0•0•Updated Mar 23, 2026Mar 23, 2026
rfam-secondary-structure
Public
A reusable React component for visualising RNA secondary structures
JavaScript
•0•0•0•0•Updated Mar 20, 2026Mar 20, 2026
rfam-taxonomy
Public
Code and data for analysing the taxonomic distribution of Rfam families
mysql python bioinformatics
mysql python bioinformatics csv taxonomy rna rfam
Python
•
Apache License 2.0
•2•8•3•1•Updated Mar 12, 2026Mar 12, 2026
rfam-rfreport
Public
Interactive reports for Rfam curation
Python
•1•0•1•0•Updated Mar 5, 2026Mar 5, 2026
rfam-viral-rna-structure
Public
Workflow for annotating and visualising RNA structures in viral genomes using Rfam, Infernal and R2DT
0•0•0•0•Updated Mar 2, 2026Mar 2, 2026
rfam-production
Public
Rfam production pipeline
python bioinformatics ncrna
python bioinformatics ncrna
Python
•
Apache License 2.0
•3•6•54•4•Updated Jan 14, 2026Jan 14, 2026
rfam-snorna-family-pipeline
Public
A Nextflow pipeline for building Rfam snoRNA families
Python
•1•0•1•0•Updated Sep 10, 2025Sep 10, 2025
rfam-zwd-import
Public
Code for importing ZWD into RNAcentral
python docker bioinformatics
python docker bioinformatics ncrna
Python
•2•1•0•0•Updated Apr 7, 2025Apr 7, 2025
rfam-3d-seed-alignments
Public
A pipeline for adding RNA 3D structures to Rfam seed alignments
docker bioinformatics python3
docker bioinformatics python3 rna 3d
Python
•
Apache License 2.0
•0•1•6•0•Updated Feb 28, 2025Feb 28, 2025
rfam-batch-search
Public
Updated version of Rfam's search API
Python
•
Apache License 2.0
•0•0•0•0•Updated Nov 1, 2024Nov 1, 2024
rfam-tutorials
Public
Learn how to annotate a genome with Rfam families using Infernal
docker bioinformatics tutorial
docker bioinformatics tutorial ncrna
Dockerfile
•2•5•1•0•Updated May 15, 2023May 15, 2023
trackhub-testing
Public
A repo to test out building trackhubs again, will be moved into Rfam later
Nextflow
•0•0•0•0•Updated Sep 8, 2022Sep 8, 2022
KubeNow
Public
Deploy Kubernetes. Now!
HCL
•
Apache License 2.0
•38•0•0•0•Updated Jun 27, 2019Jun 27, 2019
rfam-2d-browser
Public archive
Browse Rfam secondary structures by RNA type
python rna secondary-structure
python rna secondary-structure rfam
Python
•
Apache License 2.0
•0•1•0•0•Updated Feb 26, 2019Feb 26, 2019
rfam-pubmed-id-highlighter
Public
Chrome extension for identifying new literature for Rfam curation
chrome-extension google-spreadsheet pubmed
chrome-extension google-spreadsheet pubmed
JavaScript
•
Apache License 2.0
•1•2•0•0•Updated Jun 29, 2016Jun 29, 2016

ProTip! When viewing an organization's repositories, you can use the props. filter to filter by custom property.

Provide feedback

Saved searches

Use saved searches to filter your results more quickly

Rfam

All

All

18 repositories

rfam-docs

rfam-family-pipeline

rfam-seed-qc

ncrnannotator

rfam-secondary-structure

rfam-taxonomy

rfam-rfreport

rfam-viral-rna-structure

rfam-production

rfam-snorna-family-pipeline

rfam-zwd-import

rfam-3d-seed-alignments

rfam-batch-search

rfam-tutorials

trackhub-testing

KubeNow

rfam-2d-browser

rfam-pubmed-id-highlighter

All

All

Repositories list

18 repositories