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environment.yml
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218 lines (218 loc) · 6.76 KB
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name: varpipe3
channels:
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- appdirs=1.4.4=pyh9f0ad1d_0
- argcomplete=1.12.3=pyhd8ed1ab_0
- astroid=2.12.14=py310hff52083_0
- atk-1.0=2.38.0=hd4edc92_1
- atomicwrites=1.4.1=pyhd8ed1ab_0
- bcrypt=3.2.2=py310h5764c6d_1
- black=21.5b2=pyhd8ed1ab_0
- brotli=1.0.9=h166bdaf_9
- brotli-bin=1.0.9=h166bdaf_9
- brotli-python=1.0.9=py310hd8f1fbe_9
- bullet-python=2.2.0=py310hff52083_6
- bzip2=1.0.8=h7f98852_4
- ca-certificates=2023.5.7=hbcca054_0
- cairo=1.16.0=hbbf8b49_1016
- certifi=2023.5.7=pyhd8ed1ab_0
- cffi=1.15.1=py310h255011f_3
- charset-normalizer=3.2.0=pyhd8ed1ab_0
- colorama=0.4.6=pyhd8ed1ab_0
- coloredlogs=15.0.1=pyhd8ed1ab_3
- colormath=3.0.0=py_2
- commonmark=0.9.1=py_0
- contourpy=1.1.0=py310hd41b1e2_0
- cryptography=41.0.2=py310h75e40e8_0
- cycler=0.11.0=pyhd8ed1ab_0
- databind.core=1.4.0=pyhd8ed1ab_0
- databind.json=1.4.0=pyhd8ed1ab_0
- dataclasses=0.8=pyhc8e2a94_3
- deprecated=1.2.14=pyh1a96a4e_0
- dill=0.3.6=pyhd8ed1ab_1
- docker-py=6.1.3=pyhd8ed1ab_0
- docspec=1.2.0=pyhd8ed1ab_0
- docspec-python=1.2.0=pyhd8ed1ab_0
- docstring_parser=0.15=pyhd8ed1ab_0
- expat=2.5.0=hcb278e6_1
- fastqsplitter=1.2.0=py310h4b81fae_5
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=hab24e00_0
- fontconfig=2.14.2=h14ed4e7_0
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- fonttools=4.41.0=py310h2372a71_0
- fpdf=1.7.2=pyhd8ed1ab_0
- freetype=2.12.1=hca18f0e_1
- fribidi=1.0.10=h36c2ea0_0
- future=0.18.3=pyhd8ed1ab_0
- gdk-pixbuf=2.42.10=h6b639ba_2
- gettext=0.21.1=h27087fc_0
- giflib=5.2.1=h0b41bf4_3
- gmp=6.2.1=h58526e2_0
- graphite2=1.3.13=h58526e2_1001
- graphviz=8.1.0=h28d9a01_0
- gtk2=2.24.33=h90689f9_2
- gts=0.7.6=h977cf35_4
- harfbuzz=7.3.0=hdb3a94d_0
- humanfriendly=10.0=py310hff52083_4
- icu=72.1=hcb278e6_0
- idna=3.4=pyhd8ed1ab_0
- importlib-metadata=6.8.0=pyha770c72_0
- importlib_metadata=6.8.0=hd8ed1ab_0
- isa-l=2.30.0=ha770c72_4
- isort=5.12.0=pyhd8ed1ab_1
- jinja2=3.1.2=pyhd8ed1ab_1
- js2py=0.74=pyhd8ed1ab_0
- kiwisolver=1.4.4=py310hbf28c38_1
- lark=1.1.5=pyhd8ed1ab_0
- lazy-object-proxy=1.9.0=py310h1fa729e_0
- lcms2=2.15=haa2dc70_1
- ld_impl_linux-64=2.40=h41732ed_0
- lerc=4.0.0=h27087fc_0
- libblas=3.9.0=17_linux64_openblas
- libbrotlicommon=1.0.9=h166bdaf_9
- libbrotlidec=1.0.9=h166bdaf_9
- libbrotlienc=1.0.9=h166bdaf_9
- libcblas=3.9.0=17_linux64_openblas
- libdeflate=1.18=h0b41bf4_0
- libexpat=2.5.0=hcb278e6_1
- libffi=3.4.2=h7f98852_5
- libgcc-ng=13.1.0=he5830b7_0
- libgd=2.3.3=hfa28ad5_6
- libgfortran-ng=13.1.0=h69a702a_0
- libgfortran5=13.1.0=h15d22d2_0
- libglib=2.76.4=hebfc3b9_0
- libgomp=13.1.0=he5830b7_0
- libiconv=1.17=h166bdaf_0
- libjpeg-turbo=2.1.5.1=h0b41bf4_0
- liblapack=3.9.0=17_linux64_openblas
- libnsl=2.0.0=h7f98852_0
- libopenblas=0.3.23=pthreads_h80387f5_0
- libpng=1.6.39=h753d276_0
- librsvg=2.56.1=h98fae49_0
- libsodium=1.0.18=h36c2ea0_1
- libsqlite=3.42.0=h2797004_0
- libstdcxx-ng=13.1.0=hfd8a6a1_0
- libtiff=4.5.1=h8b53f26_0
- libtool=2.4.7=h27087fc_0
- libuuid=2.38.1=h0b41bf4_0
- libwebp=1.3.1=hbf2b3c1_0
- libwebp-base=1.3.1=hd590300_0
- libxcb=1.15=h0b41bf4_0
- libxml2=2.11.4=h0d562d8_0
- libzlib=1.2.13=hd590300_5
- lz4-c=1.9.4=hcb278e6_0
- lzstring=1.0.4=py_1001
- markdown=3.4.3=pyhd8ed1ab_0
- markupsafe=2.1.3=py310h2372a71_0
- matplotlib-base=3.7.2=py310hf38f957_0
- mccabe=0.7.0=pyhd8ed1ab_0
- miniwdl=1.10.0=pyhd8ed1ab_0
- multiqc=1.14=pyhdfd78af_0
- munkres=1.1.4=pyh9f0ad1d_0
- mypy_extensions=1.0.0=pyha770c72_0
- ncurses=6.4=hcb278e6_0
- networkx=3.1=pyhd8ed1ab_0
- nr.fs=1.6.3=pyhd8ed1ab_0
- nr.optional=0.2.0=pyhd8ed1ab_0
- nr.parsing.date=1.0.3=pyhd8ed1ab_0
- nr.preconditions=0.0.4=pyhd8ed1ab_0
- nr.pylang.utils=0.1.3=pyhd8ed1ab_0
- nr.stream=0.2.3=pyhd8ed1ab_0
- nr.utils.re=0.3.1=pyhd8ed1ab_0
- numpy=1.25.1=py310ha4c1d20_0
- openjpeg=2.5.0=hfec8fc6_2
- openssl=3.1.1=hd590300_1
- packaging=23.1=pyhd8ed1ab_0
- pandoc=3.1.3=h32600fe_0
- pango=1.50.14=heaa33ce_1
- paramiko=3.2.0=pyhd8ed1ab_0
- pathspec=0.11.1=pyhd8ed1ab_0
- pbzip2=1.1.13=0
- pcre2=10.40=hc3806b6_0
- pigz=2.6=h27826a3_0
- pillow=10.0.0=py310h582fbeb_0
- pip=23.2=pyhd8ed1ab_0
- pixman=0.40.0=h36c2ea0_0
- platformdirs=2.6.0=pyhd8ed1ab_0
- psutil=5.9.5=py310h1fa729e_0
- pthread-stubs=0.4=h36c2ea0_1001
- pycparser=2.21=pyhd8ed1ab_0
- pydoc-markdown=4.5.0=pyhd8ed1ab_0
- pygments=2.15.1=pyhd8ed1ab_0
- pygtail=0.14.0=pyhd8ed1ab_0
- pyjsparser=2.7.1=pyh8c360ce_0
- pylint=2.15.10=pyhd8ed1ab_0
- pynacl=1.5.0=py310h5764c6d_2
- pyparsing=3.0.9=pyhd8ed1ab_0
- pysocks=1.7.1=pyha2e5f31_6
- python=3.10.12=hd12c33a_0_cpython
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python-isal=1.1.0=py310h2372a71_2
- python-json-logger=2.0.7=pyhd8ed1ab_0
- python_abi=3.10=3_cp310
- pywin32-on-windows=0.1.0=pyh1179c8e_3
- pyyaml=5.4.1=py310h5764c6d_4
- readline=8.2=h8228510_1
- regex=2023.6.3=py310h2372a71_0
- requests=2.31.0=pyhd8ed1ab_0
- rich=12.1.0=pyhd8ed1ab_0
- rich-click=1.6.1=pyhd8ed1ab_0
- setuptools=68.0.0=pyhd8ed1ab_0
- simplejson=3.19.1=py310h1fa729e_0
- six=1.16.0=pyh6c4a22f_0
- spectra=0.0.11=py_1
- sqlite=3.38.5=h4ff8645_0
- tk=8.6.12=h27826a3_0
- toml=0.10.2=pyhd8ed1ab_0
- tomli=2.0.1=pyhd8ed1ab_0
- tomlkit=0.11.8=pyha770c72_0
- typed-ast=1.5.5=py310h2372a71_0
- typing-extensions=3.10.0.2=hd8ed1ab_0
- typing_extensions=3.10.0.2=pyha770c72_0
- tzdata=2023c=h71feb2d_0
- tzlocal=5.0.1=py310hff52083_0
- unicodedata2=15.0.0=py310h5764c6d_0
- urllib3=2.0.4=pyhd8ed1ab_0
- watchdog=3.0.0=py310hff52083_0
- websocket-client=1.6.1=pyhd8ed1ab_0
- wheel=0.40.0=pyhd8ed1ab_1
- wrapt=1.15.0=py310h1fa729e_0
- xdg=6.0.0=pyhd8ed1ab_0
- xopen=1.7.0=py310hff52083_2
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.1.1=hd590300_0
- xorg-libsm=1.2.4=h7391055_0
- xorg-libx11=1.8.6=h8ee46fc_0
- xorg-libxau=1.0.11=hd590300_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h0b41bf4_2
- xorg-libxrender=0.9.11=hd590300_0
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h0b41bf4_1003
- xorg-xproto=7.0.31=h7f98852_1007
- xz=5.2.6=h166bdaf_0
- yaml=0.2.5=h7f98852_2
- zipp=3.16.2=pyhd8ed1ab_0
- zlib=1.2.13=hd590300_5
- zstandard=0.19.0=py310h1275a96_2
- zstd=1.5.2=hfc55251_7
- pip:
- blinker==1.6.2
- click==8.1.5
- docopt==0.6.2
- flask==2.3.2
- grip==4.6.1
- itsdangerous==2.1.2
- path-and-address==2.0.1
- wdl-aid==1.0.0
- werkzeug==2.3.6
prefix: /home/dieterbest/anaconda3/envs/varpipe3