This application searches inside a text sequence for words that resemble those inside a list of similar words.

A React component to sketch / search for network motifs.

This is a scanner designed to recognise DNA motifs within a long stretch of DNA. It uses two models for discrimination, one model representing the target and the second model representing the background.

Finding Network Motifs Using MCMC Sampling

Discovering Leitmotifs in Multidimensional Time Series

Example implementation of "Mueen's Algorithm for Similarity Search" (aka MASS) for ESP32

Automatic Motif Detection wrapper for dotmotif

Gibby is a Python package designed to find the motif of a transcription factor de novo based on ChIP-seq data.

Scans TF binding sites based on motifs.

Motif Finding using Gibbs Sampler

Motif Finding through Gibbs Sampling

Coding problems from course 1 of the Bioinformatics specialization

R script for finding and scoring motifs in small genomes using position-frequency tables

Bioinformatics- High-throughput data Analysis project

A robust Python-based bioinformatics tool for comprehensive DNA sequence analysis and manipulation.

Intro to Bioinformatics course contents

DNA sequence analysis toolkit with GUI and CLI.

Workshops, Course Schedule and Teaching Assistant Review from my time as a chosen Undergraduate Teaching Assistant for the University of Pittsburgh course, BIOSC1540 - Computational Genomics taught by Dr. Miler Lee.

Finding motifs in proteins by uniprot accession number