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Core Features
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Installing
Compressing FASTQ
Compressing BAM
Compressing VCF
Compressing FASTA
Command: genozip
Command: genounzip
Command: genocat
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Index files (bai, tbi...)
Archiving
Using Genozip on an HPC
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Analyzing Data
Integrating with DICOM
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OLD (duplicate + rm original)
Analyzing data
Genozip includes a number of analysis tools:
Summary statistics
Coverage and Depth (BAM and FASTQ)
idxstats (BAM and FASTQ)
Compression Performance
Filtering & subsetting
Subsetting command line options
Downsampling and Sharding
Converting 23andMe to VCF
Miscellaneous
FASTQ-to-BAM pipeline using Genozip
Genozip diagnostics (for technical support)
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