Enter a GFA file, then specify variants, it will locate it and achieve cool visualization.
This is very practical and efficient for displaying variation or website presentation.
git clone https://github.com/JianYang-Lab/fm3-gfa.git
cd fm3-gfa
cargo build --release./target/release/fm3-gfa generate --gfa test.gfa --vcf test.1000.vcf.gz > test.all.json.tsv./target/release/fm3-gfa serve --gfa test.gfa --vcf test.1000.vcf.gz --port 8888
Server running at http://localhost:8888Enjoy the visualization at http://localhost:8888
Wenjie Wei: Developement
Yifei Wang: Concept and test data