Skip to content

@CSC-UW The Center for Sleep and Consciousness

Change the repository type filter

All

    Repositories list

    25 repositories

    • wisc_ecephys_tools

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Apr 20, 2026Apr 20, 2026

    • ecephys

      Public
      Python extracellular electrophysiology tools
      Python
      •2•3•4•0•Updated Apr 20, 2026Apr 20, 2026

    • loupe

      Public
      View and annotate raw data.
      Python
      •0•0•0•0•Updated Apr 13, 2026Apr 13, 2026

    • OFF_PERIOD_INDUCTION_MATERIALS

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Feb 24, 2026Feb 24, 2026

    • wisc_halo

      Public
      Analysis code for halorhodopsin experiments
      Jupyter Notebook
      •0•0•0•0•Updated Jan 28, 2026Jan 28, 2026

    • Marshall-Intrinsic-Units

      Public
      Code for Marshall et al. 2025, "Intrinsic Units: Identifying a system’s causal grain".
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Sep 22, 2025Sep 22, 2025

    • spikeinterface

      Public
      A Python-based module for creating flexible and robust spike sorting pipelines.
      Python
      •
      MIT License
      •258•0•0•0•Updated Mar 12, 2025Mar 12, 2025

    • Findlay_et_al_2024a

      Public
      Code for "Dissociating Artificial Intelligence from Artificial Consciousness"
      Jupyter Notebook
      •0•0•0•0•Updated Feb 26, 2025Feb 26, 2025

    • ece-env

      Public archive
      0•0•0•0•Updated Feb 21, 2025Feb 21, 2025

    • kCSD-python

      Public
      Kernel Current Source Density
      Jupyter Notebook
      •
      Other
      •24•0•0•0•Updated Nov 20, 2024Nov 20, 2024

    • ephyviewer

      Public
      Simple viewers for ephys signals, events, video and more
      Python
      •
      MIT License
      •15•0•0•0•Updated Nov 20, 2024Nov 20, 2024

    • graphiit

      Public
      Personal utilities for building PyPhi networks that need to be large and/or malleable.
      Python
      •
      GNU General Public License v3.0
      •2•6•0•0•Updated May 30, 2024May 30, 2024

    • on_off_detection

      Public
      Detect ON- and OFF-periods from single-unit activity
      Python
      •
      MIT License
      •0•0•0•0•Updated Dec 20, 2023Dec 20, 2023

    • Kilosort

      Public archive
      Fast spike sorting with drift correction for up to a thousand channels
      MATLAB
      •
      GNU General Public License v2.0
      •285•0•0•0•Updated Nov 3, 2022Nov 3, 2022

    • mousecam

      Public archive
      Simple actigraphy from Pixord cameras
      Python
      •0•0•0•0•Updated Sep 20, 2022Sep 20, 2022

    • emg_from_lfp

      Public archive
      Derive EMG from LFP through correlation of high-frequency activity.
      Python
      •0•0•0•0•Updated Jul 20, 2022Jul 20, 2022

    • ecephys_spike_sorting

      Public archive
      Modules for processing extracellular electrophysiology data from Neuropixels probes
      Python
      •
      Other
      •103•0•0•0•Updated May 11, 2022May 11, 2022

    • allenCCF

      Public archive
      Tools to work with Allen Inst CCF data in matlab
      MATLAB
      •79•0•0•0•Updated Mar 22, 2022Mar 22, 2022

    • csc-eeg-tools

      Public archive
      Set of matlab functions for EEG io, preprocessing, analysis from the Center for Sleep and Consciousness, University of Wisconsin (csc)
      MATLAB
      •7•20•7•1•Updated Feb 15, 2022Feb 15, 2022

    • sleepscore

      Public
      Load and sleepscore neuropixel data with visbrain's Sleep module
      Python
      •1•1•1•0•Updated Jan 27, 2022Jan 27, 2022

    • barcode_sync

      Public archive
      Use random sync pulses to map times from recording to another
      Jupyter Notebook
      •0•0•0•0•Updated Dec 3, 2021Dec 3, 2021

    • spikeextractors

      Public archive
      Python-based module for extracting from, converting between, and interfacing with many common file formats in extracellular recording.
      Python
      •
      MIT License
      •48•0•0•0•Updated Oct 26, 2021Oct 26, 2021

    • spikesorters

      Public archive
      Python-based module with spike sorter wrappers and a simple API for running them.
      Python
      •
      MIT License
      •20•0•0•0•Updated Jul 28, 2021Jul 28, 2021

    • InceptionTime

      Public archive
      InceptionTime: Finding AlexNet for Time Series Classification
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •163•0•0•0•Updated Oct 24, 2020Oct 24, 2020

    • iit-pseudocode

      Public archive
      Pseudocode for the major algorithms of Integrated Information Theory
      2•17•0•0•Updated Jan 29, 2016Jan 29, 2016
    ProTip! When viewing an organization's repositories, you can use the props. filter to filter by custom property.