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@HibberdLab Hibberd Lab @ Cambridge Plant Sciences

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    10 repositories

    • hibberdlab.github.com

      Public
      lab website
      CSS
      •4•6•8•0•Updated Jan 29, 2026Jan 29, 2026

    • snap

      Public
      Scalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data
      C++
      •
      Apache License 2.0
      •63•0•0•0•Updated Jan 9, 2017Jan 9, 2017

    • transrate

      Public
      Quality assessment and comparison of transcriptome assemblies
      CSS
      •
      Other
      •33•0•0•0•Updated Jun 6, 2016Jun 6, 2016

    • transrate-test-files

      Public
      0•0•0•0•Updated Feb 6, 2015Feb 6, 2015

    • bamtools

      Public
      C++ API & command-line toolkit for working with BAM data
      C++
      •
      MIT License
      •156•0•0•0•Updated Oct 7, 2014Oct 7, 2014

    • cyperus_pipeline

      Public
      Pipeline for Cyperus four-species whole-leaf de-novo RNAseq experiment
      Ruby
      •
      MIT License
      •0•1•0•0•Updated Jun 18, 2014Jun 18, 2014

    • rnaseq_tools

      Public
      miscellaneous tools for analysis of RNA-seq data
      Ruby
      •
      MIT License
      •1•3•0•1•Updated Apr 7, 2014Apr 7, 2014

    • flaveria_pipeline

      Public
      Pipeline for 4-species flaveria developmental gradient de-novo RNAseq experiment
      Ruby
      •
      MIT License
      •1•1•0•0•Updated Mar 31, 2014Mar 31, 2014

    • assemblytools

      Public
      Miscellaneous tools for transcriptome assembly
      Ruby
      •0•2•0•0•Updated Nov 15, 2013Nov 15, 2013

    • seqtools

      Public
      Tools for manipulating biological sequence data
      Ruby
      •0•2•0•0•Updated Jul 20, 2013Jul 20, 2013
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