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    • ORM and toolkit to help keep your Benchling schemas and downstream dependencies in sync.
      Python
      Apache License 2.0
      1053183Updated Apr 22, 2026Apr 22, 2026
    • dynopsi

      Public
      This repository enables inference and sampling for Dyno Psi-1, a de novo miniprotein binder design model.
      Python
      02200Updated Mar 24, 2026Mar 24, 2026
    • phi-cli

      Public
      Dyno Phi CLI for agentic protein design tasks
      Python
      MIT License
      0200Updated Mar 18, 2026Mar 18, 2026
    • openfold

      Public
      Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
      Python
      Apache License 2.0
      670000Updated Apr 24, 2025Apr 24, 2025
    • Hera is an Argo Workflows Python SDK. Hera aims to make workflow construction and submission easy and accessible to everyone! Hera abstracts away workflow setup…
      Python
      MIT License
      123000Updated Jun 22, 2023Jun 22, 2023
    • qdldl-python

      Public
      Python interface to the QDLDL(https://github.com/osqp/qdldl) free LDL factorization routine for quasi-definite linear systems
      C
      Apache License 2.0
      23000Updated Mar 21, 2023Mar 21, 2023
    • An open-source application for biological image analysis
      Python
      Other
      419000Updated Mar 14, 2023Mar 14, 2023
    • An open source image processing library
      Python
      Other
      38000Updated Mar 13, 2023Mar 13, 2023
    • Automated CI toolchain to produce precompiled opencv-python, opencv-python-headless, opencv-contrib-python and opencv-contrib-python-headless packages.
      Shell
      MIT License
      1k000Updated Mar 10, 2023Mar 10, 2023
    • DeepSpeed

      Public
      DeepSpeed is a deep learning optimization library that makes distributed training and inference easy, efficient, and effective.
      Python
      MIT License
      4.8k000Updated Jan 30, 2023Jan 30, 2023
    • ColabFold

      Public
      Making Protein folding accessible to all!
      Jupyter Notebook
      MIT License
      714000Updated Jan 19, 2023Jan 19, 2023
    • Fast implementation of the edit distance(Levenshtein distance)
      C++
      MIT License
      74000Updated Dec 18, 2022Dec 18, 2022
    • Weighted Levenshtein library
      Python
      MIT License
      27000Updated Oct 14, 2022Oct 14, 2022
    • ivar

      Public
      iVar is a computational package that contains functions broadly useful for viral amplicon-based sequencing.
      C++
      GNU General Public License v3.0
      44000Updated Oct 14, 2022Oct 14, 2022
    • The easiest and best looking Calendar Heatmap you'll find, made with Plotly.
      Python
      18000Updated Sep 21, 2022Sep 21, 2022
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