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    • PGRR

      Public
      Creative Commons Zero v1.0 Universal
      1000Updated Apr 20, 2026Apr 20, 2026
    • MetaScope

      Public
      An R-based approach for preprocessing and aligning 16S, metagenomic, and metatranscriptomic data (PathoScope version 3.0)
      R
      GNU General Public License v3.0
      82220Updated Mar 12, 2026Mar 12, 2026
    • ComBat suite of tools built upon the original sva framework
      R
      3000Updated Feb 10, 2026Feb 10, 2026
    • BatchQC

      Public
      Batch Effects Quality Control Software
      R
      Other
      131180Updated Feb 10, 2026Feb 10, 2026
    • Course materials for the Spring 2026 instance of Fundamental of Data Science (GSND 5345) at the Rutgers University School of Graduate Studies
      38000Updated Feb 2, 2026Feb 2, 2026
    • jlabwiki

      Public
      A wiki of knowledge for Johnson Lab members
      1000Updated Jan 12, 2026Jan 12, 2026
    • Profile RNA-seq data using published TB gene signatures
      R
      Other
      131320Updated Dec 15, 2025Dec 15, 2025
    • Supplementary Material for PGRR Paper
      0000Updated Sep 23, 2025Sep 23, 2025
    • LegATo

      Public
      An R-based Longitudinal mEtaGenomic Analysis Toolkit for microbiome data
      R
      Other
      1200Updated Aug 25, 2025Aug 25, 2025
    • Repository for wejlab.github.io
      0000Updated Jun 16, 2025Jun 16, 2025
    • R shiny app for interactive microbiome analysis
      R
      Other
      225601Updated Jun 5, 2025Jun 5, 2025
    • Interactively Analyze scRNA-Seq Data
      R
      Other
      82000Updated May 14, 2025May 14, 2025
    • A repository to host the files for the TBSignatureProfiler website.
      0000Updated Apr 30, 2025Apr 30, 2025
    • Repository holding documents for the MetaScope website
      0000Updated Apr 25, 2025Apr 25, 2025
    • Docs for the LegATo website
      0000Updated Oct 30, 2024Oct 30, 2024
    • This is the repository for the curatedTBExplorer shiny interface to view and analyze the curatedTBData
      R
      Other
      0140Updated Oct 2, 2024Oct 2, 2024
    • Documentation for the curatedTBExplorer
      0000Updated Sep 16, 2024Sep 16, 2024
    • Curation of existing TB gene expression datasets
      R
      Other
      3100Updated Mar 12, 2024Mar 12, 2024
    • 0000Updated Jan 22, 2024Jan 22, 2024
    • ASSIGN

      Public
      Adaptive Signature Selection and InteGratioN
      R
      Other
      0200Updated May 26, 2023May 26, 2023
    • sctk_docs

      Public
      Documentation Source for singleCellTK
      2000Updated Apr 27, 2022Apr 27, 2022
    • materials

      Public
      0000Updated Jan 11, 2020Jan 11, 2020
    • PathoStat

      Public
      The purpose of this package is to perform Statistical Analysis on the PathoScope generated reports files.
      R
      9220Updated Oct 22, 2018Oct 22, 2018
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