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Phenopackets

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  1. phenopacket-format phenopacket-format Public archive

    Python 26 10

  2. phenopacket-tools phenopacket-tools Public

    An app and library for building, conversion, and validation of GA4GH Phenopackets.

    Java 16 5

  3. phenopacket-python phenopacket-python Public archive

    Python 8 3

  4. phenopacket-reference-implementation phenopacket-reference-implementation Public archive

    Reference java implementation for phenopackets

    Java 6 9

  5. hapi-pheno hapi-pheno Public

    FHIR Client for working with phenopackets

    Java 6

  6. pxftools pxftools Public archive

    A command line utility for operating over Phenotype eXchange Format (PXF) files.

    Scala 4 1

Repositories

Showing 10 of 19 repositories
  • phenopacket-tools Public

    An app and library for building, conversion, and validation of GA4GH Phenopackets.

    phenopackets/phenopacket-tools’s past year of commit activity
    Java 16 GPL-3.0 5 7 2 Updated Mar 2, 2026
  • csv-to-phenopacket-demo Public

    Demo script to show how to convert a CSV file to a set of Phenopacket Family files

    phenopackets/csv-to-phenopacket-demo’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Feb 12, 2026
  • hapi-pheno Public

    FHIR Client for working with phenopackets

    phenopackets/hapi-pheno’s past year of commit activity
    Java 6 GPL-3.0 0 4 1 Updated Sep 4, 2025
  • hapi-pheno-server Public
    phenopackets/hapi-pheno-server’s past year of commit activity
    Java 0 Apache-2.0 0 0 0 Updated Jul 17, 2023
  • hapi-pheno-server-setup Public Forked from ShahimEssaid/hapi-docker-compose
    phenopackets/hapi-pheno-server-setup’s past year of commit activity
    Python 0 2 0 0 Updated Jun 12, 2023
  • vulcan Public

    For Phenopackets Vulcan use case related work

    phenopackets/vulcan’s past year of commit activity
    HTML 0 1 10 1 Updated Jan 26, 2023
  • phenopacket-validator Public archive

    Library and tools to help validate phenopackets

    phenopackets/phenopacket-validator’s past year of commit activity
    Java 3 BSD-3-Clause 1 5 2 Updated Jan 6, 2022
  • OMOP2Phenopacket Public
    phenopackets/OMOP2Phenopacket’s past year of commit activity
    R 3 BSD-3-Clause 1 0 0 Updated Nov 17, 2021
  • omop-exporter Public

    Export Phenopackets from OMOP

    phenopackets/omop-exporter’s past year of commit activity
    Java 2 0 0 0 Updated Nov 11, 2021
  • domain-analysis Public

    The goal of this repository is to collect and develop domain analysis content for the phenotypic domain.

    phenopackets/domain-analysis’s past year of commit activity
    2 Apache-2.0 0 16 0 Updated May 28, 2021
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