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Add Github actions builds for Linux and Mac OS Mac OS CI #1: Pull request #2330 opened by daviesrob
5m 19s daviesrob:actions
daviesrob:actions
5m 19s
Add Github actions builds for Linux and Mac OS Windows/MinGW-W64 CI #399: Pull request #2330 opened by daviesrob
7m 1s daviesrob:actions
daviesrob:actions
7m 1s
Add Github actions builds for Linux and Mac OS Linux CI #1: Pull request #2330 opened by daviesrob
4m 35s daviesrob:actions
daviesrob:actions
4m 35s
Ensure indirect function calls have the correct type. Windows/MinGW-W64 CI #398: Commit 900b93d pushed by jkbonfield
6m 44s develop
develop
6m 44s
changes for biobambam2 compatible checksum file merging Windows/MinGW-W64 CI #397: Pull request #2329 synchronize by vasudeva8
5m 50s vasudeva8:chcksum2
vasudeva8:chcksum2
5m 50s
changes for biobambam2 compatible checksum file merging Windows/MinGW-W64 CI #396: Pull request #2329 opened by vasudeva8
7m 14s vasudeva8:chcksum2
vasudeva8:chcksum2
7m 14s
Stats: check before and after region with --target-regions Windows/MinGW-W64 CI #395: Pull request #2328 opened by whitwham
7m 4s whitwham:stats_reg
whitwham:stats_reg
7m 4s
Change nquals from 256 to 257 for samtools stats. Windows/MinGW-W64 CI #394: Pull request #2326 synchronize by jkbonfield
6m 27s jkbonfield:stats_nqual95
jkbonfield:stats_nqual95
6m 27s
Change nquals from 256 to 257 for samtools stats. Windows/MinGW-W64 CI #393: Pull request #2326 opened by jkbonfield
6m 58s jkbonfield:stats_nqual95
jkbonfield:stats_nqual95
6m 58s
Fix for the footgun of repeated use of "samtools view --subsample" with the same (or default) seed Windows/MinGW-W64 CI #392: Pull request #2320 synchronize by tfenne
6m 37s tf_diff_default_subsample_seed
tf_diff_default_subsample_seed
6m 37s
Address review feedback on subsample seed handling. Windows/MinGW-W64 CI #391: Commit ddd2f6c pushed by tfenne
6m 59s tf_diff_default_subsample_seed
tf_diff_default_subsample_seed
6m 59s
Tidied up extra spaces. Windows/MinGW-W64 CI #390: Commit 99bd94f pushed by whitwham
7m 13s develop
develop
7m 13s
feat: Add --move-umi-to-tag option to samtools markdup to extract UMI from QNAME and add to RX tag. Windows/MinGW-W64 CI #389: Pull request #2316 synchronize by whitwham
7m 12s matthdsm:feat/2181
matthdsm:feat/2181
7m 12s
Ensure indirect function calls have the correct type. Windows/MinGW-W64 CI #388: Pull request #2322 opened by daviesrob
6m 39s daviesrob:function-pointers
daviesrob:function-pointers
6m 39s
Fix for the footgun of repeated use of "samtools view --subsample" with the same (or default) seed Windows/MinGW-W64 CI #387: Pull request #2320 opened by tfenne
6m 57s tf_diff_default_subsample_seed
tf_diff_default_subsample_seed
6m 57s
Fix for the footgun of repeated use of "samtools view --subsample" wi… Windows/MinGW-W64 CI #386: Commit 6b1dd82 pushed by tfenne
7m 7s tf_diff_default_subsample_seed
tf_diff_default_subsample_seed
7m 7s
markdup: O(n²) → O(n) optical duplicate detection via grid spatial index Windows/MinGW-W64 CI #385: Pull request #2319 opened by HeyangQin
6m 48s HeyangQin:markdup-grid-optical
HeyangQin:markdup-grid-optical
6m 48s
feat: Add --move-umi-to-tag option to samtools markdup to extract UMI from QNAME and add to RX tag. Windows/MinGW-W64 CI #384: Pull request #2316 synchronize by matthdsm
6m 48s matthdsm:feat/2181
matthdsm:feat/2181
6m 48s
Option Fixes (#2317) Windows/MinGW-W64 CI #382: Commit aa823b5 pushed by vasudeva8
8m 35s develop
develop
8m 35s
Option Fixes Windows/MinGW-W64 CI #381: Pull request #2317 synchronize by whitwham
6m 19s whitwham:option_mismatch
whitwham:option_mismatch
6m 19s
Option Fixes Windows/MinGW-W64 CI #380: Pull request #2317 opened by whitwham
7m 23s whitwham:option_mismatch
whitwham:option_mismatch
7m 23s
feat: Add --move-umi-to-tag option to samtools markdup to extract UMI from QNAME and add to RX tag. Windows/MinGW-W64 CI #379: Pull request #2316 synchronize by matthdsm
7m 9s matthdsm:feat/2181
matthdsm:feat/2181
7m 9s
feat: Add --move-umi-to-tag option to samtools markdup to extract UMI from QNAME and add to RX tag. Windows/MinGW-W64 CI #378: Pull request #2316 opened by matthdsm
6m 11s matthdsm:feat/2181
matthdsm:feat/2181
6m 11s
Merge version number bump and NEWS.md file from master Windows/MinGW-W64 CI #377: Commit e869be2 pushed by daviesrob
7m 32s develop
develop
7m 32s
Release 1.23.1 Windows/MinGW-W64 CI #376: Commit 6efb9b6 pushed by daviesrob
8m 30s 1.23.1
1.23.1
8m 30s