This is a bioinformatics analysis workflow for super-resolution imaging informed sc-RNA sequencing analysis. The workflow is based on some packages including Seurat, Monocle3 and SCENIC, and contains additional combining analysis.

Main Flow Chart

If you would like to contribute to this workflow, please first create your own fork of the GitHub repository. You can then work on your master branch, or create feature branches for developement that you later merge into your master branch. Once your code is finalised and working, you can create a pull request.

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