{bio}[foss/2018b] artic-ncov2019 v2020.04.13, rampart v1.2.0rc3, gotree v0.4.0, ... w/ Python 3.6.6#10459
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…-medaka.eb, rampart-1.2.0rc3-foss-2018b-Python-3.6.6.eb, gotree-0.4.0-binary.eb, goalign-0.3.2-binary.eb, IQ-TREE-1.6.12-foss-2018b.eb, Longshot-0.4.1-foss-2018b.eb, MAFFT-7.427-foss-2018b-with-extensions.eb, MUSCLE-3.8.1551-foss-2018b.eb, nodejs-12.16.1-GCCcore-7.3.0.eb, Rust-1.42.0-GCCcore-7.3.0.eb
| # Don't ever try to install unpacked source of nodejs globally! | ||
| # Always use 'npm install -g downloaded_file.tar.gz` or you will end up having broken links and installation will fail. | ||
| # -d (debug) and --timing can show errors while downloading dependencies | ||
| local_install_cmd = "npm install -d --timing --prefix %(installdir)s -g v%(version)s.tar.gz" |
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How many dependencies are involved here? Can we avoid that they're auto-downloaded by installing them ourselves?
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A lot, and I don't want to touch nodejs and its dependencies anymore.
…asyconfigs into 20200423110746_new_pr_artic-ncov201920200413
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Test report by @boegel |
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Test report by @boegel |
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Going in, thanks @Darkless012! |
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Test report by @boegel |
(created using
eb --new-pr)requires:
#10458(Clang) for Longshot,#7735(ETE),#10469(goalign, gotree),#10464(minimap2) for libdeflate