Skip to content

move netCDF to last dependency in recent GDAL easyconfigs, to make sure correct netcdf.h is picked up (not the one included in HDF dependency)#24883

Merged
bedroge merged 2 commits intoeasybuilders:developfrom
boegel:20251215183605_new_pr_GDAL371
Dec 15, 2025
Merged

move netCDF to last dependency in recent GDAL easyconfigs, to make sure correct netcdf.h is picked up (not the one included in HDF dependency)#24883
bedroge merged 2 commits intoeasybuilders:developfrom
boegel:20251215183605_new_pr_GDAL371

Conversation

@boegel
Copy link
Copy Markdown
Member

@boegel boegel commented Dec 15, 2025

(created using eb --new-pr)

@boegel
move netCDF to last dependency in recent GDAL easyconfigs, to make su…
f523074 
…re correct netcdf.h is picked up (not the one included in HDF dependency)
@github-actions github-actions Bot added 2023a 2023b 2024a issues & PRs related to 2024a common toolchains 2025a issues & PRs related to 2025a common toolchains 2025b issues & PRs related to 2025b common toolchains change labels Dec 15, 2025
@boegel boegel added this to the next release (5.2.0) milestone Dec 15, 2025
@boegel boegel changed the title move netCDF to last dependency in recent GDAL easyconfigs, to make sure correct netcdf.h is picked up (not the one included in HDF dependency) move netCDF to last dependency in recent GDAL easyconfigs, to make sure correct netcdf.h is picked up (not the one included in HDF dependency) Dec 15, 2025
@boegel boegel added bug fix EESSI Related to EESSI project and removed change labels Dec 15, 2025
@boegel
Copy link
Copy Markdown
Member Author

boegel commented Dec 15, 2025

@boegelbot please test @ jsc-zen3
CORE_CNT=16

@boegelbot
Copy link
Copy Markdown
Collaborator

boegelbot commented Dec 15, 2025

@boegel: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=24883 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_24883 --ntasks="16" ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 9181

Test results coming soon (I hope)...

Details

- notification for comment with ID 3656900189 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

@boegel boegel requested a review from bedroge December 15, 2025 18:26
@boegelbot
Copy link
Copy Markdown
Collaborator

boegelbot commented Dec 15, 2025

Test report by @boegelbot
SUCCESS
Build succeeded for 6 out of 6 (total: 2 hours 18 mins 43 secs) (6 easyconfigs in total)
jsczen3c2.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.6, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.21
See https://gist.github.com/boegelbot/0027f99b471a7cdb7cf27fb186a61c8b for a full test report.

@bedroge
Copy link
Copy Markdown
Contributor

bedroge commented Dec 15, 2025

Going in, thanks @boegel!

@bedroge bedroge merged commit d05864c into easybuilders:develop Dec 15, 2025
5 checks passed
@boegel boegel deleted the 20251215183605_new_pr_GDAL371 branch December 15, 2025 22:05
This was referenced Mar 1, 2026
Merged
Open
@Flamefire Flamefire mentioned this pull request Apr 7, 2026
Merged
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Reviewers

@bedroge bedroge bedroge approved these changes

Assignees

No one assigned

Labels

2023a 2023b 2024a issues & PRs related to 2024a common toolchains 2025a issues & PRs related to 2025a common toolchains 2025b issues & PRs related to 2025b common toolchains bug fix EESSI Related to EESSI project

Projects

None yet

Milestone

5.2.0

Development

Successfully merging this pull request may close these issues.

3 participants

@boegel @boegelbot @bedroge