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{lang}[foss/2018a] R 3.4.4#6262

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boegel merged 4 commits intoeasybuilders:developfrom
rug-cit-hpc:R-3.4.4-foss2018a
May 23, 2018
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{lang}[foss/2018a] R 3.4.4#6262
boegel merged 4 commits intoeasybuilders:developfrom
rug-cit-hpc:R-3.4.4-foss2018a

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@RvDijk RvDijk commented May 2, 2018

libgeotiff depedency was added to the GDAL module, since the R package rgdal was linking to /usr/lib64/libgeotiff.so, which resulted in errors.

@RvDijk RvDijk changed the title R for foss2018a {lang}[foss/2018a] R 3.4.4 May 2, 2018
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RvDijk commented May 23, 2018

@boegel ping?

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boegel commented May 23, 2018

Test report by @boegel
FAILED
Build succeeded for 0 out of 3 (3 easyconfigs in this PR)
node2452.golett.os - Linux centos linux 7.4.1708, Intel(R) Xeon(R) CPU E5-2680 v3 @ 2.50GHz, Python 2.7.5
See https://gist.github.com/0b84231614ca0d9e8d520e5cdc34792f for a full test report.

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boegel commented May 23, 2018

Test report by @boegel
FAILED
Build succeeded for 0 out of 3 (3 easyconfigs in this PR)
node2109.delcatty.os - Linux centos linux 7.4.1708, Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz, Python 2.7.5
See https://gist.github.com/a5983a6c4559192fd11567bcfc977d50 for a full test report.

@boegel boegel added this to the 3.6.1 milestone May 23, 2018
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boegel commented May 23, 2018

@RvDijk Sorry for not responding to this earlier... Test reports are coming up, if those don't raise any red flags this is good to go (to be included in EasyBuild v3.6.1).

'checksums': ['d52b9e04b3291f9bda8a88c174678f520ddffc5f2edf9b3dfa6d97dca943ce9a'],
}),
('foreign', '0.8-69', {
'checksums': ['820e1409162fbd6418b80a0f5a4b50d649ee74f06d195a5210745619b16e1592'],
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This should be 13689f5ec1ab09e8973be81c7f1799b7de4313176072887a9fa0b5825aed3468, see #6245

toolchain = {'name': 'foss', 'version': '2018a'}

source_urls = [
'http://download.osgeo.org/geotiff/libgeotiff/'
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@RvDijk Missing , after this line (which makes the download fail)

configopts += ' --with-jpeg=$EBROOTLIBJPEGMINTURBO'

sanity_check_paths = {
'files': ['bin/listgeo'],
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@RvDijk Please enhance to also check libraries and non-empty include dir:

sanity_check_paths = {
    'files': ['bin/listgeo', 'lib/libgeotiff.a', 'lib/libgeotiff.%s' % SHLIB_EXT],
    'dirs': ['include', 'share'],
}

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boegel commented May 23, 2018

Test report by @boegel
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in this PR)
node2409.golett.os - Linux centos linux 7.4.1708, Intel(R) Xeon(R) CPU E5-2680 v3 @ 2.50GHz, Python 2.7.5
See https://gist.github.com/34d5002c9b711017b990762ab9daafbf for a full test report.

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boegel commented May 23, 2018

Test report by @boegel
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in this PR)
node2114.delcatty.os - Linux centos linux 7.4.1708, Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz, Python 2.7.5
See https://gist.github.com/6110eca5737a6d9a41fca051c8369a43 for a full test report.

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boegel commented May 23, 2018

Going in, thanks @RvDijk!

@boegel boegel merged commit 2e5b4d6 into easybuilders:develop May 23, 2018
@RvDijk RvDijk deleted the R-3.4.4-foss2018a branch May 23, 2018 11:59
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